Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0698 |
Symbol | |
ID | 6374363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 732361 |
End bp | 733203 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642683211 |
Product | inner-membrane translocator |
Protein accession | YP_001959137 |
Protein GI | 189499667 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00451191 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAA TATACATCAT TTTGGGGTTA GCGATGAACC TTCTTGCAGG ATATTCTGGC CTTCTTTCAC TCTCTCAAGC GGCTTTTTAC GGGATCGGAG CCTACACGAC GACAGTGTTG CTGGTTTACT TCGGGTATTC TTTTCCGGCA GTTCTTGCAA TGTCCGTGAT AATAAATGTG ATAGCCTGCA TACCGGTGAT TGTGTTTTCC ATAAGATTCA GGGACCTGTT TTTTGTGCTT GCTACACTTG CCTGGCAGGT CATTGTTTTT ACTGTGCTTT ATAACTGGAT ATCAGTGACC AATGGGCCAT ACGGTATTGG TGGCATTCCA AAACCGGTTG TATTCGGGTA TGCATTTGAG TCGCTACCGC ATTTTTCTTT TCTTGCCGGA GTTGTCTGTG TTTTTGTGCT GCTGTTTTTT TACGGTCTTC ATCAGTCGCC CTTATCCAGA TACTTTCAGG GTGTCAGGGA TGACCAGCTT GCCATGTTAT CATTTGGCAA AAAGCCGGGT TATTATAAAG CTATTGCTGT CAGCATATCC AGCGGAGCAT CGGCGATCGC CGGAGCTCTT TTTGCCAGTT ATTACAGCTA TATCGACCCG ACCTCATTTA CCTTGAACGA GTCTATTCTC ATTATTTCCA TCGTTTTGAT TGGTGGATTG GGAACAATGC GCGGTTCTGT GGCAGGAGCA CTTTTTTATG TGCTTCTTCC TGAGGTTTTA CGATTTGTTA ATGTTCCTGA TGCCGTTGCC TCCAATCTTC GGATGATGAT CTACGCTTTG ATTCTGATTT TGATGGTACT GTTCCGGCCA TATGGATTTT TCGGCAATTA CAGATTCGAA TGA
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Protein sequence | MAEIYIILGL AMNLLAGYSG LLSLSQAAFY GIGAYTTTVL LVYFGYSFPA VLAMSVIINV IACIPVIVFS IRFRDLFFVL ATLAWQVIVF TVLYNWISVT NGPYGIGGIP KPVVFGYAFE SLPHFSFLAG VVCVFVLLFF YGLHQSPLSR YFQGVRDDQL AMLSFGKKPG YYKAIAVSIS SGASAIAGAL FASYYSYIDP TSFTLNESIL IISIVLIGGL GTMRGSVAGA LFYVLLPEVL RFVNVPDAVA SNLRMMIYAL ILILMVLFRP YGFFGNYRFE
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