| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0684 |
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| Symbol | |
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| ID | 6374349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 718843 |
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| End bp | 719424 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642683197 |
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| Product | conjugal transfer protein precursor |
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| Protein accession | YP_001959123 |
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| Protein GI | 189499653 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGATCAT TCAGGCCATT GCTATTCGCT TGCTTGCTTG TCGGTTCCAT TGCAGCTTTC
TGTTCAATAT TTGCTCAACC CATGATCATT TACAATGCGA CCGACAGTCT GCCACATGGG
TTCTATTGGG TTATCAAACA GCAAACCTAC GAACGAGGGC AACTGGTGGC GTTTCCGGTG
CCTCGTCAGG TGAAAAAACT GGTCACCGAG CGCGGTTGGT TGCGATTAAA CGGCTACCTC
ATCAAACCGG TTGCAGCAAA AACCGGAGAC CATATGTGGA TAAAATGTGG ACAGGCTTTT
GTGAACGGAA TGCCATTTGG GGCAATCAAA AAGAAAGATC GTCAGGGTTT GCCACTCCCA
TCTATTGTCT TTTATGACAC ACTTTCTGCA GGGAAAATAG CGGTGCTTCA GTGCGGTGAT
GACAGCTTTG ATTCGCGTTA TTTCGGTTCG ATTGATGAGA AAGATATCAT CGGCAGGGCG
GTGCCGATCT GGTTGGTTTA CACAGAAAAC AGCAAACCTC TCAGGATGGT CAACATCCAG
GAAAGCTACG TACAGAAGAA AGATAATGGT AGTGCAAGAT AA
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| Protein sequence | MRSFRPLLFA CLLVGSIAAF CSIFAQPMII YNATDSLPHG FYWVIKQQTY ERGQLVAFPV
PRQVKKLVTE RGWLRLNGYL IKPVAAKTGD HMWIKCGQAF VNGMPFGAIK KKDRQGLPLP
SIVFYDTLSA GKIAVLQCGD DSFDSRYFGS IDEKDIIGRA VPIWLVYTEN SKPLRMVNIQ
ESYVQKKDNG SAR
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