Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0661 |
Symbol | |
ID | 6374325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 690085 |
End bp | 692037 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642683173 |
Product | ABC transporter-related protein |
Protein accession | YP_001959100 |
Protein GI | 189499630 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAG CCCGAAATAT CTACCTGAGT GCAGGCACAA AGGAACTTCT GGTCAATACT TCCTTCCGTA TCGGTGACAG GGATCGTGTC GGCCTTGTAG GACTGAACGG CACAGGCAAA TCGACTCTGC TTCGGCTGAT CGCAAAAACA TCTTCCGGCA ACACTGCACA ATCAAACGGG CAGTTCATCA AATCATCCAC GACAACCATA GGCTATCTTC CTCAGGAAAT CTCTTTCGAG AACGATCTGG AAAAAACAGC GCTGCACTAT GCGCTCCTGG CAAATAAAAA GCTCTACGAT CTGTCAGAAG AGATCGAAAC CTTGCAGGAC GCACTGGCGG CACCGGAGCA CGACCATACA AGCGAAGCCT ATCACCAGAT CATCGAGAAA TACAGCAACG CGTCCCATGA ATACGAGCGC CTTGGCGGCT ACCGTATGCA GGCCGAGGCT GAAAAGGTTC TTTCCGGGTT AGGATTCAGC GCTACCGATT TTAGCAAAAA AGTCAAGGAA TTTTCCGGCG GCTGGCAGAT GCGTCTGCAT ATCTGCAAAC TCCTTCTCCA GAATCCCACA CTACTGCTGC TCGATGAGCC AACAAACCAT CTTGATATCG ATTCTCTCCG ATGGCTTGAA AACTACCTGC TGAACTACGA GCACAGCTAT ATCATCGTTT CCCATGACCG CTTCTTCCTC GACAAGCTGA CCACCCGGAC ACTCGAGATA CAGTTCAACA CAATTACAGA GTACAAGGGA AATTACAGTC TGTATGAAAA ACAGAAAGCT GAACGTTTTG AACTCATGAT GGCCAAATAC GAAAATGACC GCAAAAAGAT GGCTGACCTG AAATCTTTTG TGGATCGCTT TCGCTATAAG GCGACCAAGG CCCGGCAGGC GCAGAGTCGG CTTCGTCAGA TGCAGAAGCT CGAAGAGGAA CTTCAGGCAC CCGAAGAAGA CCTGTCAAAA ATCTCGTTCA GTTTTCCCAA AGCAAAACCG TCAGGCAAAG AGGTCATGAG ACTGCTGGGA GTATCGAAAT CGTACCGGTT GCCTGACGGC ACAGAGAAAA AGGTTCTCGA AGGCATCGAT CTTGAAGTCA TGAGAGGAGA TCGCATAGCG ATTGTCGGCT CGAACGGCGC CGGTAAAACC ACATTCTGCA AAATCGTTTC TGGCAGCATA GATTTCGAAG GCACCCTTTC CATGGGGCAT AACGTGAGCC TGAGCTACTT CGCCCAGCAC CAGACCGAAA ACCTCGATTC CGAAAAGACA ATCCTTGCCG AAATGCTCGA TGCCGCGCCT GACTCGGAAG CACAGCGCAG GGTACGCGAC ATACTCGGTT GCTTTCTCTT CAGCGGTGAT GCAGTTGAAA AAAAAATCGG CGTCCTGTCC GGGGGAGAGA AATCAAGGGT CGCGCTCGCA AGGATCCTGC TGCAGGCATC CAACCTGCTC ATCATGGACG AACCGACCAA CCATCTCGAC ATGCGTTCCA AAGAGATGCT GATCGAATCC CTGGAAAATT ACGACGGCAC ACTGATGCTG GTCAGCCATG ACCGCTACTT TCTCGACAGT CTTGTCAACA AGGTCATTGA AATCAAAAAC GGCTCTCTGG CGGTCCACCT CGGGAGTTAC GCAGAATACC TTGAAAAAGC TGACAGATCC TTCGAAGAGG AACGGAAAAA AGCATCAGAG ACGGAGAAGA AAAACAGGAA GGGAAAAACC GGGTCGTCCA AAGCCGGAAA AACAAAAAAA AACGATCACG ATCCGGACAG GCAAAACACC GTCAAGCTTG AAAAAAAAAT CCAGCAGCTG GAAGAAAAAA AGAAAGAGTA CGAAGCAACA ATGACTTCCT CAACGTTTTA CTCACAGCCG AAGGAAGAAA CAGAGAAAAC CATTGCCCTC TACGAACAAC TCTGTGCCGA GATCGATATG CTCTACAAAA AGTGGGAATC TGAACTCTCG TGA
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Protein sequence | MFEARNIYLS AGTKELLVNT SFRIGDRDRV GLVGLNGTGK STLLRLIAKT SSGNTAQSNG QFIKSSTTTI GYLPQEISFE NDLEKTALHY ALLANKKLYD LSEEIETLQD ALAAPEHDHT SEAYHQIIEK YSNASHEYER LGGYRMQAEA EKVLSGLGFS ATDFSKKVKE FSGGWQMRLH ICKLLLQNPT LLLLDEPTNH LDIDSLRWLE NYLLNYEHSY IIVSHDRFFL DKLTTRTLEI QFNTITEYKG NYSLYEKQKA ERFELMMAKY ENDRKKMADL KSFVDRFRYK ATKARQAQSR LRQMQKLEEE LQAPEEDLSK ISFSFPKAKP SGKEVMRLLG VSKSYRLPDG TEKKVLEGID LEVMRGDRIA IVGSNGAGKT TFCKIVSGSI DFEGTLSMGH NVSLSYFAQH QTENLDSEKT ILAEMLDAAP DSEAQRRVRD ILGCFLFSGD AVEKKIGVLS GGEKSRVALA RILLQASNLL IMDEPTNHLD MRSKEMLIES LENYDGTLML VSHDRYFLDS LVNKVIEIKN GSLAVHLGSY AEYLEKADRS FEEERKKASE TEKKNRKGKT GSSKAGKTKK NDHDPDRQNT VKLEKKIQQL EEKKKEYEAT MTSSTFYSQP KEETEKTIAL YEQLCAEIDM LYKKWESELS
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