| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0629 |
|---|
| Symbol | |
|---|
| ID | 6374293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 660405 |
|---|
| End bp | 661817 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642683141 |
|---|
| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| Protein accession | YP_001959068 |
|---|
| Protein GI | 189499598 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II |
|---|
| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGGG TTATCAAAGA CGGGGGTTTG TATCCGAAGA TTTTTTACAT TACAGTACTT
TACAGCAGCC TTTTGGATTA CCTGCAAGAA AACCATCGTT CGATGCAGGG GTCAGTAACA
TGGAAAGAGC ATATCAGTAT GGAAGCACCA AGAATAGATT CAATAGATTC TGCAATAGAG
GATATGAAGG CAGGAAAACT TGTCATTGTG ATTGATGATG AGGATCGTGA AGATGAAGGA
GATTTTATAG CCGCAGCGGA GAAAGTGACG CCTGAAATGG TAAACTTTAT TACCAAGGAG
GCAAGAGGAC TGCTCTGTGT TGCTGTGACT ATGGATCGTT CGAAGGAGTT GCAGCTCGAC
CCCATGGTTC AGAGAAATAC CTCACAGCAT GAGACCAACT TTACCGTATC GGTTGACGCG
ATAGCTGAGG GAGTGACAAC CGGAATTTCT GCCTATGACC GTTACATAAC CATAAAAATG
CTTGGAGATC CTGCATCTCA TCCGGATGAT TTTTCAAGAC CGGGTCACAT TTTTCCGTTG
CGCGCCATGG ACGGGGGGGT ACTCAGGAGA GTAGGGCATA CGGAGGCGGC AGTAGATCTC
GCGGAACTTG CAGGATGTTC TCCTGTGGGA TTGCTCTGTG AGATACTCCA TGACGATGGG
AGTATGGCAA GGCTTCCGGA ACTTCTGAAA ATAAAAGAGA AGTTCGGGTT GAAGCTTATC
ACCATAAAGG ATCTTGTCGC CTATCAGATG AAACGCAAAA AGCTGGTTTC ACGGTCGGTT
GAAACGAAGT TGCCGACAAT GCACGGCGAG TTCAAACTTA TTGCTTATGA AGCCTGTTGT
GACGAACATC AGCAGAACCA TCTCGCGTTT GTCAAGGGTG ATTTCGAAGC CGACGAGCCG
GTACTCGTGC GCGTGCATTC ACAGTGCGCT ACAGGTGATG TTTTCGCTTC GCTCCGTTGC
GACTGCGGCA ACCAGCTTGC TTCCGCTCTG CAGCAGATCG AAAAAGAGGG CAGAGGCGTC
CTTGTCTACC TGATGCAGGA GGGAAGAGGG ATCGGTCTGG TGAACAAACT GAAAGCATAC
AATCTTCAGG ACAAAGGGTT CGATACTGTT GAGGCTAACG AAAAACTCGG CTTCAAAGCT
GACCTGAGGG ATTACGGTAT CGGTGCGCAG ATTCTGCAGG ATCTCGGTGT GAAGCAGATG
CGCCTGATGA CCAACAATCC GAAAAAAATT ATCGGTCTTG AAGGCTACGG CCTTGAAATA
GTAGAGAGGG TGCCGATCGA AATCATTCCT AATCCATTGA ATCAGGTATA CCTTGAAACC
AAGCGGGATA AAATGGGGCA CATGATCGAT TGCTCCTGTG AGTGCGCGGA CAAGGACACC
GGGAAAGAGT CAGCAGCCGG GAACCGGAAT TGA
|
|---|
| Protein sequence | MQRVIKDGGL YPKIFYITVL YSSLLDYLQE NHRSMQGSVT WKEHISMEAP RIDSIDSAIE
DMKAGKLVIV IDDEDREDEG DFIAAAEKVT PEMVNFITKE ARGLLCVAVT MDRSKELQLD
PMVQRNTSQH ETNFTVSVDA IAEGVTTGIS AYDRYITIKM LGDPASHPDD FSRPGHIFPL
RAMDGGVLRR VGHTEAAVDL AELAGCSPVG LLCEILHDDG SMARLPELLK IKEKFGLKLI
TIKDLVAYQM KRKKLVSRSV ETKLPTMHGE FKLIAYEACC DEHQQNHLAF VKGDFEADEP
VLVRVHSQCA TGDVFASLRC DCGNQLASAL QQIEKEGRGV LVYLMQEGRG IGLVNKLKAY
NLQDKGFDTV EANEKLGFKA DLRDYGIGAQ ILQDLGVKQM RLMTNNPKKI IGLEGYGLEI
VERVPIEIIP NPLNQVYLET KRDKMGHMID CSCECADKDT GKESAAGNRN
|
|---|
| |