| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0604 |
|---|
| Symbol | |
|---|
| ID | 6374268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 636784 |
|---|
| End bp | 637848 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642683117 |
|---|
| Product | peptidase M24 |
|---|
| Protein accession | YP_001959044 |
|---|
| Protein GI | 189499574 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.10841 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00345461 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAGA GAATTGATCC GCTGCTTGAA AAAATGTCCG GAAAGGGTAT TGACGCCTTT
ATCGTTTCGG ACCTTCATGT AATACGATGG ATGACAGGGT TCAGCGGCTC CAGCGCCCGA
GTGCTGCTTA CTCCTCAACG CTCTCTGTTG TTTACGGACT TTCGATATGC TGAACAGGTG
AAGCATGAAG TTCAAGGGAT GGAATCCGTG ATTATACAAA GTGGTTTTGG TGACGCTTTT
GTCGAGCACG GGTCTCTGAA GGGAAAAAAC GTCGCCATAC AGGAGGAACA GGTTACGATT
CATGAGGCGC GTCAGCTCGG CGAAAAGCTG AAGGAGGTGA CGGTTGTTCC TCTGTACGGT
TTTTTTGACG AGTACAGGGC GATCAAGAAT GAGAGGGAAG TCGCCTGTTT GAAACAGGCG
GCAGCAATCA GTGAACAGGT GCTTGATCAG ATCGTTCCGC TTATTTCTCC CGATGTAACC
GAGTCGGAGA TTGCCGCAGA GATCTCATAC CGGCACAAGC GTCTCGGCGC AGAAAAAGAC
TCGTTTGCGC CTATTGTCGC GTCAGGCCCC CGTTCAGCGC TTCCCCATGC AAGGCCCGGT
AATGAGCGGT TCAGGTCGGG AACGTTGATT GTCATTGATA TGGGGTGCAT TTTCAAGGGC
TATGCTTCCG ATCAGACAAG GACCATCGCG TTAGGAAAAG TTCCGGAAGA AGCCAGGACG
ATCTATCAGA TTACTAAAGA GGCACAGCAG CTTGGTATCG ATTCCGCAAA GCCGGGAATG
GGCGGTCGGG AGCTTGATGC CCTTGTGAGA AGTTATATTG AAAAAAGCGG GTATGGCGAC
TTTTTCGGTC ATGGCCTTGG ACACGGTGTC GGTGTTGAGG TGCATGAAAA GCCACGTCTT
GGAAAATCAT CCGATGACCT TTTGCCCCGG CATGCTGTGT TTACCATAGA ACCAGGTATC
TACCTGCCCG GACGATACGG TGTTCGTATC GAGGATACGG TGGTTATGGA AGAACATGGT
GTGGTGCCGT TTCAGCATTT TACAAAGGAA CTGATCGAGT TGTAG
|
|---|
| Protein sequence | MQKRIDPLLE KMSGKGIDAF IVSDLHVIRW MTGFSGSSAR VLLTPQRSLL FTDFRYAEQV
KHEVQGMESV IIQSGFGDAF VEHGSLKGKN VAIQEEQVTI HEARQLGEKL KEVTVVPLYG
FFDEYRAIKN EREVACLKQA AAISEQVLDQ IVPLISPDVT ESEIAAEISY RHKRLGAEKD
SFAPIVASGP RSALPHARPG NERFRSGTLI VIDMGCIFKG YASDQTRTIA LGKVPEEART
IYQITKEAQQ LGIDSAKPGM GGRELDALVR SYIEKSGYGD FFGHGLGHGV GVEVHEKPRL
GKSSDDLLPR HAVFTIEPGI YLPGRYGVRI EDTVVMEEHG VVPFQHFTKE LIEL
|
|---|
| |