Gene Cphamn1_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0602 
Symbol 
ID6374266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp634425 
End bp635417 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content52% 
IMG OID642683115 
Productbacteriochlorophyll/chlorophyll a synthase 
Protein accessionYP_001959042 
Protein GI189499572 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01476] bacteriochlorophyll/chlorophyll synthetase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.171113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0295962 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGAA GTAACGTGAG CAATACTGAG CTGAAGCAGA GCCTGCAATC GCAACTACTC 
TCATCCGGAG TAGCTCCTGC ACAGGAAAAA GCGATAAAGC AGGCTCTAGA AAACGTCAAT
AAACCGGGAT TCAAACTCGA GCCGGCGGCT ATACTGCCGC TGATGAAACC GGTCACATGG
TTTCCTCCCA TGTGGGCTTT TGCCTGCGGC GTTATCTCCA CAGGCGAGGA TATAGCATCA
AATTGGTCGA TTCTTCTACG AGGTATCATA CTGGCCGGCC CACTGATGTG CGCCATGTCG
CAGACCATGA ACGACTATTT TGACCGGGAA GTGGATGCGA TCAACGAGCC GGATCGCCCG
ATACCATCCG GCAAGATATC CAAACAGGCC AGCTGGATTA TCACCTTCAC CCTTATCATG
ACAGGCTTTC TGGTTGCCTG GTCGATTCAT CCTTATGTCA TGGTAATTGC GTTTGTGGGC
GTTCTCATGT CACACGCATA CTCCGGGCCT CCCATTCGCG CAAAGCGAAA CGGGTGGTTC
GGCAATCTTA TTGTCGGCCT GGCCTATGAA GGCGTTGCCT GGTTGACAGG AAGTTTCGCC
ATCACACAAG GCGTTCCTTC GTCCGAATCG ATCGCCCTGG CCATTATCTT TTCCCTGGGC
GCTCATGGGA TCATGACGCT CAATGACTTC AAGTCTGTCG TCGGAGACAA CATCAGAAAA
GTCGCATCCA TCCCGGTCCA GCTCGGTGAG AAAAAAGCCG CCGTTCTCGC TTCAGTGATC
ATGGATATCG CGCAACTTGC CGCTATAGGT ATTCTGTTGG CAAAATCGTC ATTCATCGCC
TCCGGCATCG CTCTGGGCCT GCTTGCCTTT CAGATTCCCA TGCAGAAAAT TCTGATCGAT
AATCCCAAAG ATAAAGCGGT CTGGTACAAC GCATTCGGCA CACTTCTCTA CGTTCTGTCC
ATGATGGTGT GTGCTGTGGG AATCCGTCCA TAG
 
Protein sequence
MNGSNVSNTE LKQSLQSQLL SSGVAPAQEK AIKQALENVN KPGFKLEPAA ILPLMKPVTW 
FPPMWAFACG VISTGEDIAS NWSILLRGII LAGPLMCAMS QTMNDYFDRE VDAINEPDRP
IPSGKISKQA SWIITFTLIM TGFLVAWSIH PYVMVIAFVG VLMSHAYSGP PIRAKRNGWF
GNLIVGLAYE GVAWLTGSFA ITQGVPSSES IALAIIFSLG AHGIMTLNDF KSVVGDNIRK
VASIPVQLGE KKAAVLASVI MDIAQLAAIG ILLAKSSFIA SGIALGLLAF QIPMQKILID
NPKDKAVWYN AFGTLLYVLS MMVCAVGIRP