Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0589 |
Symbol | |
ID | 6374253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 619844 |
End bp | 623392 |
Gene Length | 3549 bp |
Protein Length | 1182 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642683102 |
Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein |
Protein accession | YP_001959029 |
Protein GI | 189499559 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.210599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAGA GCCGAATTTA TAAAACCATG GAAGGCAATG AAGCTCTTGC GTATGTTGCC TATAGAACGA ACGAGGTTAT TTCAATCTAT CCGATTACTC CCGCATCAAA CATGGGCGAG TACTCGGATG AATGGGCTTC TGAAGGACTT CAGAATGTTT GGGGCAGCGT CCCTCTCGTG GACGAAATGC AAAGTGAAGC CGGTGCGGCA GCTGCAGTTC ACGGCGCTGT ACAGACAGGT GCTTTGACGA CTACTTTCAC CGCTGCCCAG GGTCTGCTCC TCATGATCCC TACCATGTAT AAAATAGCAG GGGAACTGAG TCCCTGTACG ATTCATGTTT CAGCACGTTC TCTGGCCTGC CAGGCGCTAT CCATCTTCGG CGACCATGGC GACGTGATGT CGGTCCGCGG AACCGGGTTT GCACTGCTTG CCTCCTGCTC GGGTCAGGAA GTAATGGATC TGGCACTGAT AGCTCAGGCC GCGACACTTG AATCCCGCAT CCCGTTCCTG CACTTTTTCG ACGGCTTCAG AACATCTCAT GAAATCACCA AGATCGAGAT GCTTTCTGAT GAACAGATAA AAAGCATGAT TGACGATGAT CTTGTCATCG CTCACCGAAA CCGACGCATG TCACCGGACC AACCAATCAT TCGCGGGACT TCTCAGAACC CGGATGTCTA CTTCCAGGGA CGTGAAACCG TCAATCCGTT CTATCTCGCC TGCCCTGACA TTGTTGAAAA ACAGATGGAA AAGTTCACAG AAATGACCGG GCGCGAATAC AAACTCTATC AATATTACGG CGCTCCTGAC GCGGATCGTG TTATCGTCAT GATGGGCTCT GGCGCTGAAA CCGCGCTGGA GACAGTGGAG TATCTCAACA AGAAAGGTGA AAAAGTAGGT CTTATCAAAG TAAGACTTTA CAGGCCTTTC GATGTTAAAC GTTTCCTTGC CGCACTTCCC TCAAGCGTTA CATCCATAGC CGTTCTCGAC CGCCTGAAAG AGCCGGGAAG CGCAGGCGAA CCGCTTTACC TCGACGTGGT TAATGCCGTT CATGAAGGCA TGGAAGAAGG ACACCCGGAA ATCGTCGGCG GCAGATACGG CCTGTCATCC AAAGAATTCA CGCCAGCCAT GGTCATGGCT GTCTTCGAAA ATCTTTCACA GAAAGAGCCA AAAAGTCATT TTACCATCGG TATCAACGAC GATGTATCTT TCAGCAGTCT GAATTATGAT GACAGCATCT GTATTGAAGA TGACTCTGTC TTCAGGGCGA TGTTTTACGG CCTTGGATCG GACGGCACGG TCGGCGCCAA CAAAAACACG ATCAAGATCA TCGGTGAAAA CACCGAGAAC TACGCGCAGG GCTATTTTGT CTACGACTCG AAAAAAGCCG GTTCGATCAC CGTATCGCAC CTCAGGTTCG GGCCTGAACC AATCCGCTCT GCCTACAAGG TCTCGACCGC TAACTTCATC GGCTGTCATC TCTGGATATT CCTTGAATCA ATCGACCTTG TAAAAAACCT CAAGGAAGGT GGCACGCTGC TGGTAAACTC CCACTACTCG CCCGACGAAT TATGGGATCA GTTACCGAAA CATGTGCAGG AACACCTGAT TCAGAAAAAA GCGAAACTCT ATACGATTGA CGCCTACGAA GTCGCCGAGA AAAGCAACAT GGGTTTGCGC ATCAACACGA TTATGCAGGC CTGCTTCTTC GCCATTTCCG GCATCCTTCC GCGAGAAGAA GCCCTTGAAA AAATCAAGCA ATCGATCAGG GATACCTACG GCAAGAAAGG TGACGATATC GTCAACCAGA ACATCCAGGC AGTTGAAAAC TCTGTTTCTA ACCTCCATGA GGTAAAAATC GGCTCGATCG CTGACAGTAA AAAATCAATG CGTCCTCCGA TTTCCGGTGA AGCACCCGAG TTTGTCTGCA ATACCCTGGC CAAAATCATT TCTGGGGATG GTGACGACAT TCCCGTCAGC CAGATGCCTC CGGACGGCAC ATTCCCGGTC AGTACGTCCA AGTTTGAAAA ACGAAACCTT GCCGAAAAGG TCCCCGTCTG GGAAGCCGAC GTTTGTATCC AGTGCGGCAA ATGCGCTTTT ATGTGCCCTC ACGGTGTCAT CCGCTCCAAG GCATATGATC CGAAATACCT CGGAAATGCC CCGAAAACGT TTAAAAATAT CGATGCAAAA GGGAAAAACT GGGAGGGACT GAAGTATACC ATCCAGGTAG CGGTGGAAGA TTGTACGGGC TGTGAAATCT GTGCGCACAT CTGTCCGGCA AGCGATAAGA AAAATCCGGA ACGGCACGCT TTGAACATGA GCCTTCAGGC ACCGATTCGT GAAAATGAAA TCGATAACTG GAACTACTTC CTCAACATTC CTGAATTCGA CAGAGGCAAG ATCAATACCC GTCTTATCAA GGAACAGCAG CTGCAGCAGC CGCTCTTCGA GTTTTCCGGA GCCTGTACGG GGTGCGGCGA GACACCTTAT GTCAAGCTTA TAACCCAGCT TTTCGGCGAC AGACTTGTTC TCGGTAACGC AACCGGCTGT TCATCCATTT ACGGAGGCAA CCTTCCGACA ACACCGTTCT GTACAAACAC TGATGGCCTC GGACCGACGT GGTCAAATTC TCTCTTTGAG GATACCGCAG AGTTTGCAAT GGGTTTCAGA ATCTCGATCA ACAAACAGAA AGAGTTTGCG GAAGAGATGG TAAAAGCTCT TTCCGCAGAG ATCGGAGATA CCCTCACGGG CGAAATTCTC AACGCTTCCC AGAAATCGGA ACCTGAAATA TTCGAGCAGC GTAAACGGGT GCATGTACTG AAAGAAAAAC TTGCCGTCAT GGACAACCCC ATGGCAAAGA ATCTGCTCGC TGTGGCTGAC ATGCTTGTCA AAAAGAGCGT CTGGGGCATA GGCGGCGACG GCTGGGCATA CGATATCGGG TACAGCGGCG TCGATCACAT TACCGCAAGT TCAGAAAATG TCAATCTTCT CGTGCTTGAC ACAGAGGTCT ATTCCAACAC CGGAGGTCAG GCATCCAAAG CCACGCCGAA AGCAGCAGTC GCAAAATTCG CTGCCGCGGG ACGTCCTTTA CAGAAGAAAG ATCTTGGAAT GATTTCCATG ACCTATGGCA ACGCCTACGT CGCCAGCATA GCGATGGGAG CAAGGGATGA GCACACGCTC AAAGCATTCC TTGAAGCCGA AGCATACGAC GGCCCGTCAG TTATCATAGC ATACTCTCAC TGCATCGCTC ATGGCATAGA CATGGCTGTC GGCATGGAAC ACCAGAAAGC CGCTGTCGAC TCAGGGCACT GGCTTCTCTA TCGATACAAT CCTGACCGGA GAAATGAAGG CAAAAATCCT TTGAGTCTGG ATTCGAAAAA GCCGAAAATC CCTGTCGAGC AGTTCCTCAA TATGGAGAAC CGCTTCCGGA TGCTCAAGAA GAGTCATCCT GATCTGGCAA AAGAGTTCTT TGCTGAAATC CAGCAGGAAG TCGATGCCCG CTACGCAACG TATGAGTATC TTGCAGCAAG AAAATTCGAG AACGATTAA
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Protein sequence | MTKSRIYKTM EGNEALAYVA YRTNEVISIY PITPASNMGE YSDEWASEGL QNVWGSVPLV DEMQSEAGAA AAVHGAVQTG ALTTTFTAAQ GLLLMIPTMY KIAGELSPCT IHVSARSLAC QALSIFGDHG DVMSVRGTGF ALLASCSGQE VMDLALIAQA ATLESRIPFL HFFDGFRTSH EITKIEMLSD EQIKSMIDDD LVIAHRNRRM SPDQPIIRGT SQNPDVYFQG RETVNPFYLA CPDIVEKQME KFTEMTGREY KLYQYYGAPD ADRVIVMMGS GAETALETVE YLNKKGEKVG LIKVRLYRPF DVKRFLAALP SSVTSIAVLD RLKEPGSAGE PLYLDVVNAV HEGMEEGHPE IVGGRYGLSS KEFTPAMVMA VFENLSQKEP KSHFTIGIND DVSFSSLNYD DSICIEDDSV FRAMFYGLGS DGTVGANKNT IKIIGENTEN YAQGYFVYDS KKAGSITVSH LRFGPEPIRS AYKVSTANFI GCHLWIFLES IDLVKNLKEG GTLLVNSHYS PDELWDQLPK HVQEHLIQKK AKLYTIDAYE VAEKSNMGLR INTIMQACFF AISGILPREE ALEKIKQSIR DTYGKKGDDI VNQNIQAVEN SVSNLHEVKI GSIADSKKSM RPPISGEAPE FVCNTLAKII SGDGDDIPVS QMPPDGTFPV STSKFEKRNL AEKVPVWEAD VCIQCGKCAF MCPHGVIRSK AYDPKYLGNA PKTFKNIDAK GKNWEGLKYT IQVAVEDCTG CEICAHICPA SDKKNPERHA LNMSLQAPIR ENEIDNWNYF LNIPEFDRGK INTRLIKEQQ LQQPLFEFSG ACTGCGETPY VKLITQLFGD RLVLGNATGC SSIYGGNLPT TPFCTNTDGL GPTWSNSLFE DTAEFAMGFR ISINKQKEFA EEMVKALSAE IGDTLTGEIL NASQKSEPEI FEQRKRVHVL KEKLAVMDNP MAKNLLAVAD MLVKKSVWGI GGDGWAYDIG YSGVDHITAS SENVNLLVLD TEVYSNTGGQ ASKATPKAAV AKFAAAGRPL QKKDLGMISM TYGNAYVASI AMGARDEHTL KAFLEAEAYD GPSVIIAYSH CIAHGIDMAV GMEHQKAAVD SGHWLLYRYN PDRRNEGKNP LSLDSKKPKI PVEQFLNMEN RFRMLKKSHP DLAKEFFAEI QQEVDARYAT YEYLAARKFE ND
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