Gene Cphamn1_0589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0589 
Symbol 
ID6374253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp619844 
End bp623392 
Gene Length3549 bp 
Protein Length1182 aa 
Translation table11 
GC content50% 
IMG OID642683102 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain protein 
Protein accessionYP_001959029 
Protein GI189499559 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID[TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.210599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAGA GCCGAATTTA TAAAACCATG GAAGGCAATG AAGCTCTTGC GTATGTTGCC 
TATAGAACGA ACGAGGTTAT TTCAATCTAT CCGATTACTC CCGCATCAAA CATGGGCGAG
TACTCGGATG AATGGGCTTC TGAAGGACTT CAGAATGTTT GGGGCAGCGT CCCTCTCGTG
GACGAAATGC AAAGTGAAGC CGGTGCGGCA GCTGCAGTTC ACGGCGCTGT ACAGACAGGT
GCTTTGACGA CTACTTTCAC CGCTGCCCAG GGTCTGCTCC TCATGATCCC TACCATGTAT
AAAATAGCAG GGGAACTGAG TCCCTGTACG ATTCATGTTT CAGCACGTTC TCTGGCCTGC
CAGGCGCTAT CCATCTTCGG CGACCATGGC GACGTGATGT CGGTCCGCGG AACCGGGTTT
GCACTGCTTG CCTCCTGCTC GGGTCAGGAA GTAATGGATC TGGCACTGAT AGCTCAGGCC
GCGACACTTG AATCCCGCAT CCCGTTCCTG CACTTTTTCG ACGGCTTCAG AACATCTCAT
GAAATCACCA AGATCGAGAT GCTTTCTGAT GAACAGATAA AAAGCATGAT TGACGATGAT
CTTGTCATCG CTCACCGAAA CCGACGCATG TCACCGGACC AACCAATCAT TCGCGGGACT
TCTCAGAACC CGGATGTCTA CTTCCAGGGA CGTGAAACCG TCAATCCGTT CTATCTCGCC
TGCCCTGACA TTGTTGAAAA ACAGATGGAA AAGTTCACAG AAATGACCGG GCGCGAATAC
AAACTCTATC AATATTACGG CGCTCCTGAC GCGGATCGTG TTATCGTCAT GATGGGCTCT
GGCGCTGAAA CCGCGCTGGA GACAGTGGAG TATCTCAACA AGAAAGGTGA AAAAGTAGGT
CTTATCAAAG TAAGACTTTA CAGGCCTTTC GATGTTAAAC GTTTCCTTGC CGCACTTCCC
TCAAGCGTTA CATCCATAGC CGTTCTCGAC CGCCTGAAAG AGCCGGGAAG CGCAGGCGAA
CCGCTTTACC TCGACGTGGT TAATGCCGTT CATGAAGGCA TGGAAGAAGG ACACCCGGAA
ATCGTCGGCG GCAGATACGG CCTGTCATCC AAAGAATTCA CGCCAGCCAT GGTCATGGCT
GTCTTCGAAA ATCTTTCACA GAAAGAGCCA AAAAGTCATT TTACCATCGG TATCAACGAC
GATGTATCTT TCAGCAGTCT GAATTATGAT GACAGCATCT GTATTGAAGA TGACTCTGTC
TTCAGGGCGA TGTTTTACGG CCTTGGATCG GACGGCACGG TCGGCGCCAA CAAAAACACG
ATCAAGATCA TCGGTGAAAA CACCGAGAAC TACGCGCAGG GCTATTTTGT CTACGACTCG
AAAAAAGCCG GTTCGATCAC CGTATCGCAC CTCAGGTTCG GGCCTGAACC AATCCGCTCT
GCCTACAAGG TCTCGACCGC TAACTTCATC GGCTGTCATC TCTGGATATT CCTTGAATCA
ATCGACCTTG TAAAAAACCT CAAGGAAGGT GGCACGCTGC TGGTAAACTC CCACTACTCG
CCCGACGAAT TATGGGATCA GTTACCGAAA CATGTGCAGG AACACCTGAT TCAGAAAAAA
GCGAAACTCT ATACGATTGA CGCCTACGAA GTCGCCGAGA AAAGCAACAT GGGTTTGCGC
ATCAACACGA TTATGCAGGC CTGCTTCTTC GCCATTTCCG GCATCCTTCC GCGAGAAGAA
GCCCTTGAAA AAATCAAGCA ATCGATCAGG GATACCTACG GCAAGAAAGG TGACGATATC
GTCAACCAGA ACATCCAGGC AGTTGAAAAC TCTGTTTCTA ACCTCCATGA GGTAAAAATC
GGCTCGATCG CTGACAGTAA AAAATCAATG CGTCCTCCGA TTTCCGGTGA AGCACCCGAG
TTTGTCTGCA ATACCCTGGC CAAAATCATT TCTGGGGATG GTGACGACAT TCCCGTCAGC
CAGATGCCTC CGGACGGCAC ATTCCCGGTC AGTACGTCCA AGTTTGAAAA ACGAAACCTT
GCCGAAAAGG TCCCCGTCTG GGAAGCCGAC GTTTGTATCC AGTGCGGCAA ATGCGCTTTT
ATGTGCCCTC ACGGTGTCAT CCGCTCCAAG GCATATGATC CGAAATACCT CGGAAATGCC
CCGAAAACGT TTAAAAATAT CGATGCAAAA GGGAAAAACT GGGAGGGACT GAAGTATACC
ATCCAGGTAG CGGTGGAAGA TTGTACGGGC TGTGAAATCT GTGCGCACAT CTGTCCGGCA
AGCGATAAGA AAAATCCGGA ACGGCACGCT TTGAACATGA GCCTTCAGGC ACCGATTCGT
GAAAATGAAA TCGATAACTG GAACTACTTC CTCAACATTC CTGAATTCGA CAGAGGCAAG
ATCAATACCC GTCTTATCAA GGAACAGCAG CTGCAGCAGC CGCTCTTCGA GTTTTCCGGA
GCCTGTACGG GGTGCGGCGA GACACCTTAT GTCAAGCTTA TAACCCAGCT TTTCGGCGAC
AGACTTGTTC TCGGTAACGC AACCGGCTGT TCATCCATTT ACGGAGGCAA CCTTCCGACA
ACACCGTTCT GTACAAACAC TGATGGCCTC GGACCGACGT GGTCAAATTC TCTCTTTGAG
GATACCGCAG AGTTTGCAAT GGGTTTCAGA ATCTCGATCA ACAAACAGAA AGAGTTTGCG
GAAGAGATGG TAAAAGCTCT TTCCGCAGAG ATCGGAGATA CCCTCACGGG CGAAATTCTC
AACGCTTCCC AGAAATCGGA ACCTGAAATA TTCGAGCAGC GTAAACGGGT GCATGTACTG
AAAGAAAAAC TTGCCGTCAT GGACAACCCC ATGGCAAAGA ATCTGCTCGC TGTGGCTGAC
ATGCTTGTCA AAAAGAGCGT CTGGGGCATA GGCGGCGACG GCTGGGCATA CGATATCGGG
TACAGCGGCG TCGATCACAT TACCGCAAGT TCAGAAAATG TCAATCTTCT CGTGCTTGAC
ACAGAGGTCT ATTCCAACAC CGGAGGTCAG GCATCCAAAG CCACGCCGAA AGCAGCAGTC
GCAAAATTCG CTGCCGCGGG ACGTCCTTTA CAGAAGAAAG ATCTTGGAAT GATTTCCATG
ACCTATGGCA ACGCCTACGT CGCCAGCATA GCGATGGGAG CAAGGGATGA GCACACGCTC
AAAGCATTCC TTGAAGCCGA AGCATACGAC GGCCCGTCAG TTATCATAGC ATACTCTCAC
TGCATCGCTC ATGGCATAGA CATGGCTGTC GGCATGGAAC ACCAGAAAGC CGCTGTCGAC
TCAGGGCACT GGCTTCTCTA TCGATACAAT CCTGACCGGA GAAATGAAGG CAAAAATCCT
TTGAGTCTGG ATTCGAAAAA GCCGAAAATC CCTGTCGAGC AGTTCCTCAA TATGGAGAAC
CGCTTCCGGA TGCTCAAGAA GAGTCATCCT GATCTGGCAA AAGAGTTCTT TGCTGAAATC
CAGCAGGAAG TCGATGCCCG CTACGCAACG TATGAGTATC TTGCAGCAAG AAAATTCGAG
AACGATTAA
 
Protein sequence
MTKSRIYKTM EGNEALAYVA YRTNEVISIY PITPASNMGE YSDEWASEGL QNVWGSVPLV 
DEMQSEAGAA AAVHGAVQTG ALTTTFTAAQ GLLLMIPTMY KIAGELSPCT IHVSARSLAC
QALSIFGDHG DVMSVRGTGF ALLASCSGQE VMDLALIAQA ATLESRIPFL HFFDGFRTSH
EITKIEMLSD EQIKSMIDDD LVIAHRNRRM SPDQPIIRGT SQNPDVYFQG RETVNPFYLA
CPDIVEKQME KFTEMTGREY KLYQYYGAPD ADRVIVMMGS GAETALETVE YLNKKGEKVG
LIKVRLYRPF DVKRFLAALP SSVTSIAVLD RLKEPGSAGE PLYLDVVNAV HEGMEEGHPE
IVGGRYGLSS KEFTPAMVMA VFENLSQKEP KSHFTIGIND DVSFSSLNYD DSICIEDDSV
FRAMFYGLGS DGTVGANKNT IKIIGENTEN YAQGYFVYDS KKAGSITVSH LRFGPEPIRS
AYKVSTANFI GCHLWIFLES IDLVKNLKEG GTLLVNSHYS PDELWDQLPK HVQEHLIQKK
AKLYTIDAYE VAEKSNMGLR INTIMQACFF AISGILPREE ALEKIKQSIR DTYGKKGDDI
VNQNIQAVEN SVSNLHEVKI GSIADSKKSM RPPISGEAPE FVCNTLAKII SGDGDDIPVS
QMPPDGTFPV STSKFEKRNL AEKVPVWEAD VCIQCGKCAF MCPHGVIRSK AYDPKYLGNA
PKTFKNIDAK GKNWEGLKYT IQVAVEDCTG CEICAHICPA SDKKNPERHA LNMSLQAPIR
ENEIDNWNYF LNIPEFDRGK INTRLIKEQQ LQQPLFEFSG ACTGCGETPY VKLITQLFGD
RLVLGNATGC SSIYGGNLPT TPFCTNTDGL GPTWSNSLFE DTAEFAMGFR ISINKQKEFA
EEMVKALSAE IGDTLTGEIL NASQKSEPEI FEQRKRVHVL KEKLAVMDNP MAKNLLAVAD
MLVKKSVWGI GGDGWAYDIG YSGVDHITAS SENVNLLVLD TEVYSNTGGQ ASKATPKAAV
AKFAAAGRPL QKKDLGMISM TYGNAYVASI AMGARDEHTL KAFLEAEAYD GPSVIIAYSH
CIAHGIDMAV GMEHQKAAVD SGHWLLYRYN PDRRNEGKNP LSLDSKKPKI PVEQFLNMEN
RFRMLKKSHP DLAKEFFAEI QQEVDARYAT YEYLAARKFE ND