Gene Cphamn1_0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0555 
Symbol 
ID6374219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp589220 
End bp590446 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content48% 
IMG OID642683071 
Productprotein of unknown function DUF81 
Protein accessionYP_001958998 
Protein GI189499528 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.589078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGATG AAAAAACAGA AAATACAGTG TTGATGCTGT TGTATATCGT CTTTTTTGTG 
CTTGTAAACA GTCCGGCATC AGTAGGTGCC GGGAGTGATT CATTGCGGCA ACACCGTGGA
GAGACGCTGA CTGAGGTTTT TGACACGCCG TTGCCTGTAT CAGGAAGGCT CGGTGAAATA
GCTGCGAAAA CCCCCACAGG ATTACAACAG GGAACCATAA ATCCGGACGC GGAAAAAGGG
TTTGCAGGGA TACCCGGAGC ACCAAAAATC AACTATTTTG TTGCTTTTTT ATGGGCGGTC
TGGGTAGGGT GGATTTTCTC GACCGTCGGC GCTTTTGGCG GCATTATGGC GGGAGTGGGG
CATTTGACCC TTTTTGGTTT AGGCAGCTAC GCCGACAGTT TCACGTCTAC CAATCCTGAG
CTGAACGCGT TATTGACAGA CTCGATCAGG GCGACCAATC AATACCTTGT GGCTTTAGCC
GCACTGATTT CGACCTATAA TTTTTACAGG ATGAAACGGC TGGTCGTACC GTTAGGTGTG
GCATTGGGGG CCGGAAGTGT TATTGGAGGC TTGTTGATCC CCTGGCTTAC CGCGGGTAAA
ATACAGCTTG GCGACTATAT CGGTTTGTTC GGTCTGGCCG TGCTGGTCAT AGGGGCTTTT
ATTTTTTATG GTACAACCGG AAGAGCCCGT TCTACAAAGA AAAAAGCCAA TGAAGCATCT
GCAGCGTTTC AGCGATTGAT GAAAGAAAAT GATGTTTCGG AGTCACAGGG TGTGCATATC
GTCTCTTCGG GCTTGAGAGA GGTAACGTTT TCCTTCTACG GAACACAATT CAGCTTTAAT
CCTTTATTGG CTGTCGCCGG CGGTTTGGTT ATCGCGTCGA TATCCTCGTT TCTGGGAATA
GGGGGCGGCT TTTTGTACGT TCCTTTTTTG ACGGCAGTAA TCGGTCTGCC GATGTTTATA
GTCGTGGGGA CTTCTGCGTT AGCCGTCCTC CTGAGCATGA TCACCAGTAT TTTTTCTTAT
GTGGTTCTGA AAGGGACGTT TATCAGCTGG GATCTTGTGG GGGTTGAGAT GGTTGGTGTT
TTTGTTGGTG CGATGATAGG TCCGAGAACC CAGAAGTATA TCCCGGAAAT ATGGTTGAAG
AGACTCTTTG TACTACTTGC CGTCTATGTT GGCTTGAGAT ATTTCAGCAA GGGGTTTTTC
GGGGAGAGTT GGCTGCCTCC TTTTTAA
 
Protein sequence
MRDEKTENTV LMLLYIVFFV LVNSPASVGA GSDSLRQHRG ETLTEVFDTP LPVSGRLGEI 
AAKTPTGLQQ GTINPDAEKG FAGIPGAPKI NYFVAFLWAV WVGWIFSTVG AFGGIMAGVG
HLTLFGLGSY ADSFTSTNPE LNALLTDSIR ATNQYLVALA ALISTYNFYR MKRLVVPLGV
ALGAGSVIGG LLIPWLTAGK IQLGDYIGLF GLAVLVIGAF IFYGTTGRAR STKKKANEAS
AAFQRLMKEN DVSESQGVHI VSSGLREVTF SFYGTQFSFN PLLAVAGGLV IASISSFLGI
GGGFLYVPFL TAVIGLPMFI VVGTSALAVL LSMITSIFSY VVLKGTFISW DLVGVEMVGV
FVGAMIGPRT QKYIPEIWLK RLFVLLAVYV GLRYFSKGFF GESWLPPF