Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0547 |
Symbol | |
ID | 6374211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 578389 |
End bp | 578865 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642683064 |
Product | TspO and MBR like protein |
Protein accession | YP_001958991 |
Protein GI | 189499521 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACTA TAGTATTGCT CATTGGCTGT ATTGCCCTTT GCATGCTTGT GGGTTTTGCT GGTAGCGTAT TTACACCGGC ACCGGGATCG GAGTGGTATT ATTCACTCTT GAACAAGCCT TCATGGAACC CGCCCAGCTG GCTTTTTCCT CCAGTATGGA CAGTGCTCTT TATCCTTATG GGAGTTTCCC TTTCAATGGT TGTTAAAGAG GGGGTTGATA CACCGATTGT AACGGCTGCG CTGATTGTTT TCGCTGTTCA ACTATTCTTG AATTTTGGAT GGTCAGCGAT GTTTTTCGGT CTGCAGTCGC CTTTTTGGGG ATATCTTGAA ATTGCCGCAC TCTGGATATC GATAGTCCTG ACGATCGTAC TCTTTGGCGC GGTGTCCAAA ACGGCGGCTT TTCTTCTTAT CCCTTACTTG TTATGGGTAA GTTTTGCTTC CTATCTGACG TTCACTCTCT GGAAGTTGAA TCCGTGA
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Protein sequence | MNTIVLLIGC IALCMLVGFA GSVFTPAPGS EWYYSLLNKP SWNPPSWLFP PVWTVLFILM GVSLSMVVKE GVDTPIVTAA LIVFAVQLFL NFGWSAMFFG LQSPFWGYLE IAALWISIVL TIVLFGAVSK TAAFLLIPYL LWVSFASYLT FTLWKLNP
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