Gene Cphamn1_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0547 
Symbol 
ID6374211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp578389 
End bp578865 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content46% 
IMG OID642683064 
ProductTspO and MBR like protein 
Protein accessionYP_001958991 
Protein GI189499521 
COG category[T] Signal transduction mechanisms 
COG ID[COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTA TAGTATTGCT CATTGGCTGT ATTGCCCTTT GCATGCTTGT GGGTTTTGCT 
GGTAGCGTAT TTACACCGGC ACCGGGATCG GAGTGGTATT ATTCACTCTT GAACAAGCCT
TCATGGAACC CGCCCAGCTG GCTTTTTCCT CCAGTATGGA CAGTGCTCTT TATCCTTATG
GGAGTTTCCC TTTCAATGGT TGTTAAAGAG GGGGTTGATA CACCGATTGT AACGGCTGCG
CTGATTGTTT TCGCTGTTCA ACTATTCTTG AATTTTGGAT GGTCAGCGAT GTTTTTCGGT
CTGCAGTCGC CTTTTTGGGG ATATCTTGAA ATTGCCGCAC TCTGGATATC GATAGTCCTG
ACGATCGTAC TCTTTGGCGC GGTGTCCAAA ACGGCGGCTT TTCTTCTTAT CCCTTACTTG
TTATGGGTAA GTTTTGCTTC CTATCTGACG TTCACTCTCT GGAAGTTGAA TCCGTGA
 
Protein sequence
MNTIVLLIGC IALCMLVGFA GSVFTPAPGS EWYYSLLNKP SWNPPSWLFP PVWTVLFILM 
GVSLSMVVKE GVDTPIVTAA LIVFAVQLFL NFGWSAMFFG LQSPFWGYLE IAALWISIVL
TIVLFGAVSK TAAFLLIPYL LWVSFASYLT FTLWKLNP