Gene Cphamn1_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0529 
Symbol 
ID6374193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp557752 
End bp558294 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content45% 
IMG OID642683046 
Productisochorismatase hydrolase 
Protein accessionYP_001958973 
Protein GI189499503 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAATTC CTCAAGATAC GGTTTTGTTG ATCATCGATG TTCAGGGAAA GCTGGCAGAG 
ATGGTTTTTG AATCTGAAGC TGTTCAAAAA AATATTTCGA AACTGATCAG GGCGTGCAGG
ATTCTCGATG TCCCCCTTCT CTATACGGAG CAGTACCCTA AAGGTCTTGG GCATACAGTT
TCTGTACTTG AAGAGCTGCT TGTCAACGAG AAACCTTTGG AAAAAATCAC ATTCAGTTGC
TGCGGTGAAG AGTCTTTTAT GGAGAAACTG AGAGGCCTGA ACAAAAACAA CGTGCTTGTT
ACCGGCATGG AAACCCATGT GTGCGTCTAT CAGACGGCCA ATGAACTGAT CGAGTACGGC
TACAATGTTC ATTTGATTAC CGACGCGGTT TCTTCCCGGA CAAAGGATAA CAGGGATTTG
GGAATACGCT GTATCGAAAA AGCAGGCGCG ATGCTGAAAA GCACGGAGAT GGTGATTTTC
GAATTGTTAC GGATCGCTCA GGGAGAGGAG TTCAAGGCGA TCTCGAAAAT CATTAAGGAA
TAA
 
Protein sequence
MIIPQDTVLL IIDVQGKLAE MVFESEAVQK NISKLIRACR ILDVPLLYTE QYPKGLGHTV 
SVLEELLVNE KPLEKITFSC CGEESFMEKL RGLNKNNVLV TGMETHVCVY QTANELIEYG
YNVHLITDAV SSRTKDNRDL GIRCIEKAGA MLKSTEMVIF ELLRIAQGEE FKAISKIIKE