Gene Cphamn1_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0505 
Symbol 
ID6374169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp527333 
End bp527752 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content50% 
IMG OID642683022 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_001958949 
Protein GI189499479 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.6696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAG ACGCGCTTGG CAGTTACCGG GGTTCTCTCG CTGAACTTGA CAGGATCATA 
GATGAGGACC CGAACAACGC TGAAGTGTAC TATGATCGGG CAAATGTAAG AAGCGGCAGA
GGCGATATAG AGGGGGCGAT CGATGATTAC TCAAAAGCGA TAGAGCTCGG GCTCAGGTTG
CGCGAGAGGT TTCTTGCCCA CGGTAACAGG GGGATCGCTC GTGCTGCTCT GGAGGATAAT
CAGGGGGCGT TCGAGGATTT TACGGTAATT ATCGAAGCTT CTCCGAAAAA CAGGGGAATT
TTGAGGACGG CCCTCTACAA TCGTGCCATG CTCAGGGAAA AAACAGGTGA TATCGAAGGC
GCTGCCATGG ATTATCAGCA GCGTTCAGAA ATAATAATAA AAAGCAAAAC GGGAGAGTGA
 
Protein sequence
MLKDALGSYR GSLAELDRII DEDPNNAEVY YDRANVRSGR GDIEGAIDDY SKAIELGLRL 
RERFLAHGNR GIARAALEDN QGAFEDFTVI IEASPKNRGI LRTALYNRAM LREKTGDIEG
AAMDYQQRSE IIIKSKTGE