Gene Cphamn1_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0500 
Symbol 
ID6374164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp522988 
End bp524016 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content52% 
IMG OID642683017 
Productpeptidase M50 
Protein accessionYP_001958944 
Protein GI189499474 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0750] Predicted membrane-associated Zn-dependent proteases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.394939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.2077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGAGC ACCTTCCCTC TCGACAAAGC ATTCTTGCCG AACAAAACTA TCCACTTCAT 
CTCGGCTTAT TTGCGCTGAC TCTGGTAACG ACTCTCTGGG CAGGCGCTTT CTGGATGGGA
CATGACGTTC GTTTTGAGAG TGTTTCTCTC TTTCTTCGAG ACCTCGGCTA TGGTGCTCCT
TATGCGCTCT CACTGCTGTT ATTTCTCGGA ACTCATGAGT TCGGTCATTT TTTCGCCTCA
CTCAATCACC GGATGCGGGC AACGCTTCCC TACTTCATTC CCGTTCCTCC GCTGCCTTTT
ATTCTGAGCC TTGGCACGCT TGGGGCAGTC ATTCGCATCA AAGACAGGAT CCCCGACACG
AAAGCACTTT TCGATACCGG GATCAGCGGG CCTTTGAGTG GATTTGTCAT CGCTGCGGGA
CTGCTTGTCT ACGGTTTCAC CCATCTGCCC CCCTTTGAGT ATATCTACTC CATACACCCT
GAATACGAAG CTTTTGGAGG CATTCCCGCA CCGCCCCCCC CAAATACTCT TTTCCTCGGC
AAAAACCTGC TCTACCTGCT GCTTGAAAAA GTAACCGCAC CGGCATACAT ACCCCCGATG
ACTGAAATGT ACCACTACCC GTTTCTTTTT GCCGGCTGGC TCGGGTGCTT TGTCACAGCG
CTGAATCTCC TTCCCGTTGG ACAACTCGAT GGCGGACATG TCATCTATGC CATGTTCGGC
AGGAAAAAAC ACCGGTTGGC CGCCTTACTC TTCCTGCTCT TTATCGTACT TCTCGGTCTC
CCCTCTCTTG TGCTGCTGCT CATTGAACTG TTTATCCCCG GCACACCCGT TCCTCTCCCT
GAATGGGCGT TTGAGTGGTC CTGGGGGGGC TGGGTGCTGT GGGCAATTAT ACTGACCCGG
TTTCTCGGTA TCGATCACCC GCCGACCGCA ATGGATCATG AGCTTTCTGC CGGAAGAAAA
TTCATGGGAT GGATCGCCAT CATAATTTTC TTTTTGTGCT TTACACCGGT ACCTTTCGGA
ATTGTTTAA
 
Protein sequence
MREHLPSRQS ILAEQNYPLH LGLFALTLVT TLWAGAFWMG HDVRFESVSL FLRDLGYGAP 
YALSLLLFLG THEFGHFFAS LNHRMRATLP YFIPVPPLPF ILSLGTLGAV IRIKDRIPDT
KALFDTGISG PLSGFVIAAG LLVYGFTHLP PFEYIYSIHP EYEAFGGIPA PPPPNTLFLG
KNLLYLLLEK VTAPAYIPPM TEMYHYPFLF AGWLGCFVTA LNLLPVGQLD GGHVIYAMFG
RKKHRLAALL FLLFIVLLGL PSLVLLLIEL FIPGTPVPLP EWAFEWSWGG WVLWAIILTR
FLGIDHPPTA MDHELSAGRK FMGWIAIIIF FLCFTPVPFG IV