Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0500 |
Symbol | |
ID | 6374164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 522988 |
End bp | 524016 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642683017 |
Product | peptidase M50 |
Protein accession | YP_001958944 |
Protein GI | 189499474 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.394939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.2077 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGAGC ACCTTCCCTC TCGACAAAGC ATTCTTGCCG AACAAAACTA TCCACTTCAT CTCGGCTTAT TTGCGCTGAC TCTGGTAACG ACTCTCTGGG CAGGCGCTTT CTGGATGGGA CATGACGTTC GTTTTGAGAG TGTTTCTCTC TTTCTTCGAG ACCTCGGCTA TGGTGCTCCT TATGCGCTCT CACTGCTGTT ATTTCTCGGA ACTCATGAGT TCGGTCATTT TTTCGCCTCA CTCAATCACC GGATGCGGGC AACGCTTCCC TACTTCATTC CCGTTCCTCC GCTGCCTTTT ATTCTGAGCC TTGGCACGCT TGGGGCAGTC ATTCGCATCA AAGACAGGAT CCCCGACACG AAAGCACTTT TCGATACCGG GATCAGCGGG CCTTTGAGTG GATTTGTCAT CGCTGCGGGA CTGCTTGTCT ACGGTTTCAC CCATCTGCCC CCCTTTGAGT ATATCTACTC CATACACCCT GAATACGAAG CTTTTGGAGG CATTCCCGCA CCGCCCCCCC CAAATACTCT TTTCCTCGGC AAAAACCTGC TCTACCTGCT GCTTGAAAAA GTAACCGCAC CGGCATACAT ACCCCCGATG ACTGAAATGT ACCACTACCC GTTTCTTTTT GCCGGCTGGC TCGGGTGCTT TGTCACAGCG CTGAATCTCC TTCCCGTTGG ACAACTCGAT GGCGGACATG TCATCTATGC CATGTTCGGC AGGAAAAAAC ACCGGTTGGC CGCCTTACTC TTCCTGCTCT TTATCGTACT TCTCGGTCTC CCCTCTCTTG TGCTGCTGCT CATTGAACTG TTTATCCCCG GCACACCCGT TCCTCTCCCT GAATGGGCGT TTGAGTGGTC CTGGGGGGGC TGGGTGCTGT GGGCAATTAT ACTGACCCGG TTTCTCGGTA TCGATCACCC GCCGACCGCA ATGGATCATG AGCTTTCTGC CGGAAGAAAA TTCATGGGAT GGATCGCCAT CATAATTTTC TTTTTGTGCT TTACACCGGT ACCTTTCGGA ATTGTTTAA
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Protein sequence | MREHLPSRQS ILAEQNYPLH LGLFALTLVT TLWAGAFWMG HDVRFESVSL FLRDLGYGAP YALSLLLFLG THEFGHFFAS LNHRMRATLP YFIPVPPLPF ILSLGTLGAV IRIKDRIPDT KALFDTGISG PLSGFVIAAG LLVYGFTHLP PFEYIYSIHP EYEAFGGIPA PPPPNTLFLG KNLLYLLLEK VTAPAYIPPM TEMYHYPFLF AGWLGCFVTA LNLLPVGQLD GGHVIYAMFG RKKHRLAALL FLLFIVLLGL PSLVLLLIEL FIPGTPVPLP EWAFEWSWGG WVLWAIILTR FLGIDHPPTA MDHELSAGRK FMGWIAIIIF FLCFTPVPFG IV
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