Gene Cphamn1_0498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0498 
Symbol 
ID6374162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp518338 
End bp521895 
Gene Length3558 bp 
Protein Length1185 aa 
Translation table11 
GC content46% 
IMG OID642683015 
Productchromosome segregation protein SMC 
Protein accessionYP_001958942 
Protein GI189499472 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02168] chromosome segregation protein SMC, common bacterial type 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTTT CAAAAATCGA GCTTTTTGGC TTCAAGAGCT TCGCGCATAA AGTCAAAATC 
ACTTTCGATA AAGGCCTTAC CGCCATTGTC GGCCCCAACG GATGCGGCAA AACCAATGTT
GTCGATGCTA TCCGATGGGT TCTGGGTGAG CAGAAAACCT CTCTTCTGCG TTCCTCCAAA
ATGGAAAGCA TTATTTTCAA CGGTTCGAGA AAACTTAAAC CTCTGAGCAT GTCGGAGGTC
TCTATCACCA TTGAAAACAC CCGTAACATC CTGCCCACAG AATATACGGA AGTGACCGTC
ACGCGAAGGG TCTATCGAAA CGGTGAGAGC GACTATCTGC TCAACCAGGT ACCTTGCAGA
CTCAAGGATA TTCTCGAACT CTTTGCCGAC ACCGGAATGG GCAGCGATGC CTACTCTGTC
ATAGAGCTGA AAATGATCGA AGAAATCATC AACAACAAGA GTGATGAAAG ACTGAAGCTT
TTCGAAGAGG CGGCAGGAAT AACAAGATAC AAGCATCGCC GTAAACAGAC GTTCAAACAG
CTCGAAGCCA CAAAACGCGA CCTTGAAAGG GTGGATGATG TCCTTGCGGA AGTCACGAAA
AAAGTCAGGA GCCTGAAATC CCAGGTAAGA AAAGCCAAAC AGTACCATGA AATCAATACC
TCGTTCAGAG ATCTTGACCT GACGCTCAGT AAAATCCATT TTGATGCATG TGTCGATAAA
CTTCACCCCC TGAAAACCGA CATATCGGAA CAGGAGAGAG TAGTTCAGGA GCTGACAACA
AAAATCGCGT CAAATGACAG TATCCTGCAG GAATCTGAAC TTGAACAGCT TGAGCAGGAG
CGAATGCTTT CAGAAGCCCA GTCAGTTCTG AACGAAAAAA ACAAGGAACT TCACGCTCTT
GAAAAAAACA TCCTGCAGGC ACAGGAACAG GAAAAAAATC TCCGGCATAA CACAACTCGC
ATCGCAGGAG CGATTACCGA AAAAAAGCAG CAGGCTGTCG CACGTGAACA CGAGAAAAAA
CAGCTTACCG ACCAGCTGCA ACCGCTTGAA AAACACTTTT CCATCATAGA AAACGAACTG
CTTACCCTGA AAAAAGAGCA GAACACGCTG CAGAGGGCCC TCGTCCAGTC AAGGAATGAC
GTGGAAAAAG AAAGGGCAAG GATCTCCGGG CTTCAAAAAG CGGCCTCTCA CCTTCATGTG
ACTCGACAAA GACTGGAAAC CACCATCGAT CATCTGAAAA GCTCAATGGC GAGCCTGGAT
CAGCACAGAA ATGAACTCCT GAAAAACATC AACGATGCCC TGCCGGCAAG AGAGAAGCTC
AACGAACGTA TCGAGAAACA GAAAACCGTT ATATCTTCAG TAAACAAAGA ATTCCTATCG
CTGAAAAAAC TGCAACAGGA TCTGGGCGAA CAACTTGAGG CAAAAAAAGA ACTTCTCCTG
AAATTGCGAT CCCGGCGTGA TCAACTGAGA AACAGGATAT TGCTGGCAAA CTCAATCCTC
GATGATTATG AAGGTCTTCC GGAAGGGATT TCATGGCTGG AAAACGGCAA GCAGGGAAAA
ACAGGACACG GCTGCCTTTC CGACCTTCTG TCGCTTGAAG ATGTTCACCG CAAAGCGATC
AACGCAGTCC TGGGGGAATC CCTCGGTTAC TATGTATGCT CATCTCTACC GGAGGCAAAA
ACAGGAATCC GCTCTCTTGC AGAGGCAGGA AAAGGAAAAG TGACGTTTCT TGTTCTTGAT
ATGCTCAAAA CCCCTGAGAT GGACGCATCA CCTGCAATCA ACGGAACAAT AAAGATCAAC
AGTATTCTGA GCTTCCCGAA AAGTCTCAGC AAGGCTATAA CAGCACTTAC TGAAGGCTGT
TATCTTGTCG ATACCTTCTC AACGGCAGAA ACACTTGCTT CAGAGAATCC CGGATATACA
TTCGTGACCC CTGACGGAGA AAAAATAGGA GGAAACGGCG TTGTTTTCGG CGGAAGCTCC
GCAGAAAACG AGGGCCTTCG TCTGGGAAAA AAAGCTGAAC GGGATCAACT GCGTGCTGAA
GAACACGATC TGGAAAAAGA GCTTGGGCTC GAACAATCCA GGCTGCAGTC CATCAGAAAC
AAACTTCAGA ATATCAAACT CGGGGAAAAA GAGAAACAAC GTACTACACT TGAATGGGAA
ATCGGAGAAA TCAACAACAA CCTTGCCCGT ATGGATATCG AGCATGCATC ACAACGGCAG
GATATCGAGC GGACGGAAAA AGAAATCGCA AATACAGAAA AGCGTTTAAA AACCACAGAA
GCAGAACTGG AGAAACTGCT GCCGGAGATA GCGGCGCACA AAGAAACAAA CACAGCGCTT
CATACATCGC TGGAGAATGC TCGAAAAGAG CTCGAAAAGA ATGAAAGGAA CCTCAGCCTC
CATTCACAGG AAGTCCAGCG CCATGTCAAC AAACATAAAG ACAGCGTGCT GGAACTTGAA
AAGTTGAGAC TCCGCATACA GTCCTGTGAG CAGAACAGAT CATCGCTGGA GCGGGAAATC
GAAAAAATGC AGAAAGAAAC AGAGCAAACT GACAACGCTC TTGTTGCAAC TGCAGCGAAA
ATCCAAACGC ATCGGAATGA ACTGGAAGCC TGTCTGGTCT CTTCAGGAGC CGAACAGCAG
AAACTGAATG AGATGGAAAC CCGTTACAAT GAATGCAAGA TTGCCAATCA GGAAAAAAGA
AACAGCCTGA GAGAGTTACG ACGAAAACAT GAAGTGGAAC AACAGATTCA CGATGAACTC
CGTCGCAGTG CGGCAGAAAT TGAAAAAACA ATAGACAGTA TTTTCACTTC TGTTGAAACT
CGATATAACT GCAGTATCGA CGCAATAGAC ATAGAGGCTC CTGAAAATTT CGACAGGGAA
AACGCTCAAA AACAGCTTGA TGAAATCCGA AACAGAATTG AGCGGTTCGG CGCAGTTAAT
GAACTTGCTC TTGAAGAGTA TGAAACAGAA CAGGAACGAC TTGACTTTCT CACAGAACAG
AAGGAAGACC TTATAGGAGC TGAAACTCAA CTGAGAACAA CGATAGAAGA AATCAACAAA
ACTGCTCTGA AAAAGTTCGA TGAGACATTC AATGCTGTCA GAAGCAACTT TGTGCGCATA
TTCAGAGAAC TTTTCGAAGA AACAGATGAA GCGGATCTGC TCATCACTTC GGAGGAAGAT
CCTCTTGAAG CTCATATAGA AATCGTAGCT AAACCGCGAG GAAAAAAGCC GTTATCAATC
GAACAGCTGA GCGGAGGAGA AAAAGCCCTG ACAGCTTTGG CCCTGCTCTT TTCCATCTAT
CTGGTTAAGC CCAGTCCTTT CTGTATTCTG GATGAGGTCG ACGCGCCTCT GGATGACGCG
AATATCGAGC GGTTTATTAA ACTCCTGAAA AAATTTGAGA ATAACACCCA ATTTATTATT
GTTACTCACA ATAAAAACAC CATGGCCTCT TCTCAGGCCC TTTTCGGCGT AACCATGGAA
GAAGAAGGTG TTTCCAGGCT CATCCCGGTT ACCCTGGGAA AAACCCGATC TGAATCCCCG
ACACCTGCCG ATGTATAA
 
Protein sequence
MYLSKIELFG FKSFAHKVKI TFDKGLTAIV GPNGCGKTNV VDAIRWVLGE QKTSLLRSSK 
MESIIFNGSR KLKPLSMSEV SITIENTRNI LPTEYTEVTV TRRVYRNGES DYLLNQVPCR
LKDILELFAD TGMGSDAYSV IELKMIEEII NNKSDERLKL FEEAAGITRY KHRRKQTFKQ
LEATKRDLER VDDVLAEVTK KVRSLKSQVR KAKQYHEINT SFRDLDLTLS KIHFDACVDK
LHPLKTDISE QERVVQELTT KIASNDSILQ ESELEQLEQE RMLSEAQSVL NEKNKELHAL
EKNILQAQEQ EKNLRHNTTR IAGAITEKKQ QAVAREHEKK QLTDQLQPLE KHFSIIENEL
LTLKKEQNTL QRALVQSRND VEKERARISG LQKAASHLHV TRQRLETTID HLKSSMASLD
QHRNELLKNI NDALPAREKL NERIEKQKTV ISSVNKEFLS LKKLQQDLGE QLEAKKELLL
KLRSRRDQLR NRILLANSIL DDYEGLPEGI SWLENGKQGK TGHGCLSDLL SLEDVHRKAI
NAVLGESLGY YVCSSLPEAK TGIRSLAEAG KGKVTFLVLD MLKTPEMDAS PAINGTIKIN
SILSFPKSLS KAITALTEGC YLVDTFSTAE TLASENPGYT FVTPDGEKIG GNGVVFGGSS
AENEGLRLGK KAERDQLRAE EHDLEKELGL EQSRLQSIRN KLQNIKLGEK EKQRTTLEWE
IGEINNNLAR MDIEHASQRQ DIERTEKEIA NTEKRLKTTE AELEKLLPEI AAHKETNTAL
HTSLENARKE LEKNERNLSL HSQEVQRHVN KHKDSVLELE KLRLRIQSCE QNRSSLEREI
EKMQKETEQT DNALVATAAK IQTHRNELEA CLVSSGAEQQ KLNEMETRYN ECKIANQEKR
NSLRELRRKH EVEQQIHDEL RRSAAEIEKT IDSIFTSVET RYNCSIDAID IEAPENFDRE
NAQKQLDEIR NRIERFGAVN ELALEEYETE QERLDFLTEQ KEDLIGAETQ LRTTIEEINK
TALKKFDETF NAVRSNFVRI FRELFEETDE ADLLITSEED PLEAHIEIVA KPRGKKPLSI
EQLSGGEKAL TALALLFSIY LVKPSPFCIL DEVDAPLDDA NIERFIKLLK KFENNTQFII
VTHNKNTMAS SQALFGVTME EEGVSRLIPV TLGKTRSESP TPADV