Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0498 |
Symbol | |
ID | 6374162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 518338 |
End bp | 521895 |
Gene Length | 3558 bp |
Protein Length | 1185 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642683015 |
Product | chromosome segregation protein SMC |
Protein accession | YP_001958942 |
Protein GI | 189499472 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCTTT CAAAAATCGA GCTTTTTGGC TTCAAGAGCT TCGCGCATAA AGTCAAAATC ACTTTCGATA AAGGCCTTAC CGCCATTGTC GGCCCCAACG GATGCGGCAA AACCAATGTT GTCGATGCTA TCCGATGGGT TCTGGGTGAG CAGAAAACCT CTCTTCTGCG TTCCTCCAAA ATGGAAAGCA TTATTTTCAA CGGTTCGAGA AAACTTAAAC CTCTGAGCAT GTCGGAGGTC TCTATCACCA TTGAAAACAC CCGTAACATC CTGCCCACAG AATATACGGA AGTGACCGTC ACGCGAAGGG TCTATCGAAA CGGTGAGAGC GACTATCTGC TCAACCAGGT ACCTTGCAGA CTCAAGGATA TTCTCGAACT CTTTGCCGAC ACCGGAATGG GCAGCGATGC CTACTCTGTC ATAGAGCTGA AAATGATCGA AGAAATCATC AACAACAAGA GTGATGAAAG ACTGAAGCTT TTCGAAGAGG CGGCAGGAAT AACAAGATAC AAGCATCGCC GTAAACAGAC GTTCAAACAG CTCGAAGCCA CAAAACGCGA CCTTGAAAGG GTGGATGATG TCCTTGCGGA AGTCACGAAA AAAGTCAGGA GCCTGAAATC CCAGGTAAGA AAAGCCAAAC AGTACCATGA AATCAATACC TCGTTCAGAG ATCTTGACCT GACGCTCAGT AAAATCCATT TTGATGCATG TGTCGATAAA CTTCACCCCC TGAAAACCGA CATATCGGAA CAGGAGAGAG TAGTTCAGGA GCTGACAACA AAAATCGCGT CAAATGACAG TATCCTGCAG GAATCTGAAC TTGAACAGCT TGAGCAGGAG CGAATGCTTT CAGAAGCCCA GTCAGTTCTG AACGAAAAAA ACAAGGAACT TCACGCTCTT GAAAAAAACA TCCTGCAGGC ACAGGAACAG GAAAAAAATC TCCGGCATAA CACAACTCGC ATCGCAGGAG CGATTACCGA AAAAAAGCAG CAGGCTGTCG CACGTGAACA CGAGAAAAAA CAGCTTACCG ACCAGCTGCA ACCGCTTGAA AAACACTTTT CCATCATAGA AAACGAACTG CTTACCCTGA AAAAAGAGCA GAACACGCTG CAGAGGGCCC TCGTCCAGTC AAGGAATGAC GTGGAAAAAG AAAGGGCAAG GATCTCCGGG CTTCAAAAAG CGGCCTCTCA CCTTCATGTG ACTCGACAAA GACTGGAAAC CACCATCGAT CATCTGAAAA GCTCAATGGC GAGCCTGGAT CAGCACAGAA ATGAACTCCT GAAAAACATC AACGATGCCC TGCCGGCAAG AGAGAAGCTC AACGAACGTA TCGAGAAACA GAAAACCGTT ATATCTTCAG TAAACAAAGA ATTCCTATCG CTGAAAAAAC TGCAACAGGA TCTGGGCGAA CAACTTGAGG CAAAAAAAGA ACTTCTCCTG AAATTGCGAT CCCGGCGTGA TCAACTGAGA AACAGGATAT TGCTGGCAAA CTCAATCCTC GATGATTATG AAGGTCTTCC GGAAGGGATT TCATGGCTGG AAAACGGCAA GCAGGGAAAA ACAGGACACG GCTGCCTTTC CGACCTTCTG TCGCTTGAAG ATGTTCACCG CAAAGCGATC AACGCAGTCC TGGGGGAATC CCTCGGTTAC TATGTATGCT CATCTCTACC GGAGGCAAAA ACAGGAATCC GCTCTCTTGC AGAGGCAGGA AAAGGAAAAG TGACGTTTCT TGTTCTTGAT ATGCTCAAAA CCCCTGAGAT GGACGCATCA CCTGCAATCA ACGGAACAAT AAAGATCAAC AGTATTCTGA GCTTCCCGAA AAGTCTCAGC AAGGCTATAA CAGCACTTAC TGAAGGCTGT TATCTTGTCG ATACCTTCTC AACGGCAGAA ACACTTGCTT CAGAGAATCC CGGATATACA TTCGTGACCC CTGACGGAGA AAAAATAGGA GGAAACGGCG TTGTTTTCGG CGGAAGCTCC GCAGAAAACG AGGGCCTTCG TCTGGGAAAA AAAGCTGAAC GGGATCAACT GCGTGCTGAA GAACACGATC TGGAAAAAGA GCTTGGGCTC GAACAATCCA GGCTGCAGTC CATCAGAAAC AAACTTCAGA ATATCAAACT CGGGGAAAAA GAGAAACAAC GTACTACACT TGAATGGGAA ATCGGAGAAA TCAACAACAA CCTTGCCCGT ATGGATATCG AGCATGCATC ACAACGGCAG GATATCGAGC GGACGGAAAA AGAAATCGCA AATACAGAAA AGCGTTTAAA AACCACAGAA GCAGAACTGG AGAAACTGCT GCCGGAGATA GCGGCGCACA AAGAAACAAA CACAGCGCTT CATACATCGC TGGAGAATGC TCGAAAAGAG CTCGAAAAGA ATGAAAGGAA CCTCAGCCTC CATTCACAGG AAGTCCAGCG CCATGTCAAC AAACATAAAG ACAGCGTGCT GGAACTTGAA AAGTTGAGAC TCCGCATACA GTCCTGTGAG CAGAACAGAT CATCGCTGGA GCGGGAAATC GAAAAAATGC AGAAAGAAAC AGAGCAAACT GACAACGCTC TTGTTGCAAC TGCAGCGAAA ATCCAAACGC ATCGGAATGA ACTGGAAGCC TGTCTGGTCT CTTCAGGAGC CGAACAGCAG AAACTGAATG AGATGGAAAC CCGTTACAAT GAATGCAAGA TTGCCAATCA GGAAAAAAGA AACAGCCTGA GAGAGTTACG ACGAAAACAT GAAGTGGAAC AACAGATTCA CGATGAACTC CGTCGCAGTG CGGCAGAAAT TGAAAAAACA ATAGACAGTA TTTTCACTTC TGTTGAAACT CGATATAACT GCAGTATCGA CGCAATAGAC ATAGAGGCTC CTGAAAATTT CGACAGGGAA AACGCTCAAA AACAGCTTGA TGAAATCCGA AACAGAATTG AGCGGTTCGG CGCAGTTAAT GAACTTGCTC TTGAAGAGTA TGAAACAGAA CAGGAACGAC TTGACTTTCT CACAGAACAG AAGGAAGACC TTATAGGAGC TGAAACTCAA CTGAGAACAA CGATAGAAGA AATCAACAAA ACTGCTCTGA AAAAGTTCGA TGAGACATTC AATGCTGTCA GAAGCAACTT TGTGCGCATA TTCAGAGAAC TTTTCGAAGA AACAGATGAA GCGGATCTGC TCATCACTTC GGAGGAAGAT CCTCTTGAAG CTCATATAGA AATCGTAGCT AAACCGCGAG GAAAAAAGCC GTTATCAATC GAACAGCTGA GCGGAGGAGA AAAAGCCCTG ACAGCTTTGG CCCTGCTCTT TTCCATCTAT CTGGTTAAGC CCAGTCCTTT CTGTATTCTG GATGAGGTCG ACGCGCCTCT GGATGACGCG AATATCGAGC GGTTTATTAA ACTCCTGAAA AAATTTGAGA ATAACACCCA ATTTATTATT GTTACTCACA ATAAAAACAC CATGGCCTCT TCTCAGGCCC TTTTCGGCGT AACCATGGAA GAAGAAGGTG TTTCCAGGCT CATCCCGGTT ACCCTGGGAA AAACCCGATC TGAATCCCCG ACACCTGCCG ATGTATAA
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Protein sequence | MYLSKIELFG FKSFAHKVKI TFDKGLTAIV GPNGCGKTNV VDAIRWVLGE QKTSLLRSSK MESIIFNGSR KLKPLSMSEV SITIENTRNI LPTEYTEVTV TRRVYRNGES DYLLNQVPCR LKDILELFAD TGMGSDAYSV IELKMIEEII NNKSDERLKL FEEAAGITRY KHRRKQTFKQ LEATKRDLER VDDVLAEVTK KVRSLKSQVR KAKQYHEINT SFRDLDLTLS KIHFDACVDK LHPLKTDISE QERVVQELTT KIASNDSILQ ESELEQLEQE RMLSEAQSVL NEKNKELHAL EKNILQAQEQ EKNLRHNTTR IAGAITEKKQ QAVAREHEKK QLTDQLQPLE KHFSIIENEL LTLKKEQNTL QRALVQSRND VEKERARISG LQKAASHLHV TRQRLETTID HLKSSMASLD QHRNELLKNI NDALPAREKL NERIEKQKTV ISSVNKEFLS LKKLQQDLGE QLEAKKELLL KLRSRRDQLR NRILLANSIL DDYEGLPEGI SWLENGKQGK TGHGCLSDLL SLEDVHRKAI NAVLGESLGY YVCSSLPEAK TGIRSLAEAG KGKVTFLVLD MLKTPEMDAS PAINGTIKIN SILSFPKSLS KAITALTEGC YLVDTFSTAE TLASENPGYT FVTPDGEKIG GNGVVFGGSS AENEGLRLGK KAERDQLRAE EHDLEKELGL EQSRLQSIRN KLQNIKLGEK EKQRTTLEWE IGEINNNLAR MDIEHASQRQ DIERTEKEIA NTEKRLKTTE AELEKLLPEI AAHKETNTAL HTSLENARKE LEKNERNLSL HSQEVQRHVN KHKDSVLELE KLRLRIQSCE QNRSSLEREI EKMQKETEQT DNALVATAAK IQTHRNELEA CLVSSGAEQQ KLNEMETRYN ECKIANQEKR NSLRELRRKH EVEQQIHDEL RRSAAEIEKT IDSIFTSVET RYNCSIDAID IEAPENFDRE NAQKQLDEIR NRIERFGAVN ELALEEYETE QERLDFLTEQ KEDLIGAETQ LRTTIEEINK TALKKFDETF NAVRSNFVRI FRELFEETDE ADLLITSEED PLEAHIEIVA KPRGKKPLSI EQLSGGEKAL TALALLFSIY LVKPSPFCIL DEVDAPLDDA NIERFIKLLK KFENNTQFII VTHNKNTMAS SQALFGVTME EEGVSRLIPV TLGKTRSESP TPADV
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