Gene Cphamn1_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0493 
Symbol 
ID6374157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp514092 
End bp514754 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content50% 
IMG OID642683010 
Productendonuclease III 
Protein accessionYP_001958937 
Protein GI189499467 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGTGCCG CTGGGCGATG GCTTGAATTC TTCAGCAAAC CCAAAATAGC GCTCATCGAT 
GCGGCTCTCG GAACACAATA CCCCTCACCG AAAAGCGAAC TGCACTACTC GACCCCTTTT
CAGATGCTCA TAGCAACCAT CCTGGCCGCA CAAGCCACTG ACAAACGGGT GAACGTCATA
ACTGCTGAAC TTTTTTCCCG CTGTCCGGAC GCGGAAAGCA TGAGCCGCAT AGAGCTGGAT
GAGCTGAAAA CAATTATCCG GTCCATCAAT TATTATAACA ACAAGGCTAA AAACATTCTT
GCAGCCAGCA GGATGCTTGT GGAATCATAC AAGGGAGAGG TTCCCTCTAC ACGCGAAAAG
CTTGAAAGCC TTCCGGGGGT CGGAAGAAAA ACAGCAAATA TTGTTCTCAG CAACGCATTC
GGTCAGCCTG TAATGGCTGT CGATACACAC GTTCACCGGG TTGCCAACCG TATCGGGCTG
GTAAAAACCA AAAAACCAAG AGAAACGGAG GATGCGCTTA TCGCCGCCAT TCCGGCAGAA
CTGGTGATCA ACTTTCACCA CTATCTTGTC CTGCACGGAC GATATACCTG CAAGGCGAGA
AAACCGCTTT GCACGAAATG CCCTGTCCTG CCTGCCTGTG ACTACGAAAA CAAGACAATC
TGA
 
Protein sequence
MGAAGRWLEF FSKPKIALID AALGTQYPSP KSELHYSTPF QMLIATILAA QATDKRVNVI 
TAELFSRCPD AESMSRIELD ELKTIIRSIN YYNNKAKNIL AASRMLVESY KGEVPSTREK
LESLPGVGRK TANIVLSNAF GQPVMAVDTH VHRVANRIGL VKTKKPRETE DALIAAIPAE
LVINFHHYLV LHGRYTCKAR KPLCTKCPVL PACDYENKTI