Gene Cphamn1_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0485 
Symbol 
ID6374149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp506931 
End bp507491 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content53% 
IMG OID642683002 
Productcell wall hydrolase SleB 
Protein accessionYP_001958929 
Protein GI189499459 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAA TGAGCGAAGT AAAAGAACGG GTCAGCACCA TTCCTGTTGT AAAGGCGAAA 
GCCCTTGGCG GGGTTGTGGC CATTGCCGGG CTGTGTTCTA TGGGAATGAT GGTGAAGGGT
CATACGTCGC ATCAGCCCCG AGAGAAGACG GAGCAACATT ACAAGGACTA TGTTAAGGCT
TTCAACAGCA CTGAAATGGA ATGGCTTGCC CGCAACATCT ACCATGAAGC CCGTGGAGAG
TCGTGGGAAG GGATGCTCGC GGTCGGAGTG GTGACGCTCA ATCGCGTCAA GTCTCCTGAT
TATCCCGATA CCATAGAACG TGTCGTCAAG GACTATAAAC AATTCAGCTG GTTCTGGGAC
GGCAAGTCCG ACAGGGTGAG GAACCGGAAA GCCTGGAGAA AGGCCAAGGC GGCGGCTGCA
GAAGTCATGC TGAATCCGGA TCATCCTCTC GCCGGGGAGC TCAAGGGAGT GATCTACTAC
CATGCCGATT ACGTCGCGCC TTACTGGGCG GGGACAAAGC AGGAGGTCAC CACGATCGGC
AACCATATTT TCTACATGTA G
 
Protein sequence
MNLMSEVKER VSTIPVVKAK ALGGVVAIAG LCSMGMMVKG HTSHQPREKT EQHYKDYVKA 
FNSTEMEWLA RNIYHEARGE SWEGMLAVGV VTLNRVKSPD YPDTIERVVK DYKQFSWFWD
GKSDRVRNRK AWRKAKAAAA EVMLNPDHPL AGELKGVIYY HADYVAPYWA GTKQEVTTIG
NHIFYM