Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0461 |
Symbol | |
ID | 6374125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 483434 |
End bp | 484117 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642682979 |
Product | ABC transporter-related protein |
Protein accession | YP_001958906 |
Protein GI | 189499436 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.880159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACAA CCATTTTAAA ACTTGTTGCT GTCCGAAAGG AACTTGAGCT CTCCCGTGAT ATCCGGCAAA CCATTATTCC CGGTCTTTCT CTTGAGGTCG AGGAAGGTGA ATTTATCTCC ATCACAGGAC CTTCCGGTTC CGGGAAATCA ACCCTTCTGT ATATCATGGG AGGTCTTGAC AAGCCTACAT TCGGAGAGGT CTGGCTGGAT GGAGTGAATA TTTCAGACAA GAACGAGAAG GAGATGTCAA AGATCCGCAA TGAAAAAATC GGTTTTATCT ACCAGTTTCA TTTTCTGCTT CCGGAGTTCA CGGCCGTTGA AAATGTCAGT ATGCCGATGA TGATTAACAG TACCAGGACA AAAGCGGAAA TACGACAGAG AGCTCAAATG CTGCTTGACA AGGTTGGCTT GAGCGACCGT TATGATTACC GGCCAAGCCA GCTTTCCGGA GGTCAGCAGC AGCGGGTTGC CGTTGCACGC TCTCTTGCCA ATGAACCAAA GCTTGTTCTC GGGGATGAGC CGACCGGGAA TCTGGACTCA AAATCGGGCA ATCAGGTTTA CGAGCTTTTT GAACAGCTCA ACCAGGAGTT TAACCAGACG GTCATCTTTG TCACGCATGA TGAGGAATTC GCCCGCAGAG CGAAGCGGCG CATACATCTT GTGGATGGAA AAATTGATAA GTAG
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Protein sequence | MSTTILKLVA VRKELELSRD IRQTIIPGLS LEVEEGEFIS ITGPSGSGKS TLLYIMGGLD KPTFGEVWLD GVNISDKNEK EMSKIRNEKI GFIYQFHFLL PEFTAVENVS MPMMINSTRT KAEIRQRAQM LLDKVGLSDR YDYRPSQLSG GQQQRVAVAR SLANEPKLVL GDEPTGNLDS KSGNQVYELF EQLNQEFNQT VIFVTHDEEF ARRAKRRIHL VDGKIDK
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