Gene Cphamn1_0461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0461 
Symbol 
ID6374125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp483434 
End bp484117 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content48% 
IMG OID642682979 
ProductABC transporter-related protein 
Protein accessionYP_001958906 
Protein GI189499436 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.880159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAA CCATTTTAAA ACTTGTTGCT GTCCGAAAGG AACTTGAGCT CTCCCGTGAT 
ATCCGGCAAA CCATTATTCC CGGTCTTTCT CTTGAGGTCG AGGAAGGTGA ATTTATCTCC
ATCACAGGAC CTTCCGGTTC CGGGAAATCA ACCCTTCTGT ATATCATGGG AGGTCTTGAC
AAGCCTACAT TCGGAGAGGT CTGGCTGGAT GGAGTGAATA TTTCAGACAA GAACGAGAAG
GAGATGTCAA AGATCCGCAA TGAAAAAATC GGTTTTATCT ACCAGTTTCA TTTTCTGCTT
CCGGAGTTCA CGGCCGTTGA AAATGTCAGT ATGCCGATGA TGATTAACAG TACCAGGACA
AAAGCGGAAA TACGACAGAG AGCTCAAATG CTGCTTGACA AGGTTGGCTT GAGCGACCGT
TATGATTACC GGCCAAGCCA GCTTTCCGGA GGTCAGCAGC AGCGGGTTGC CGTTGCACGC
TCTCTTGCCA ATGAACCAAA GCTTGTTCTC GGGGATGAGC CGACCGGGAA TCTGGACTCA
AAATCGGGCA ATCAGGTTTA CGAGCTTTTT GAACAGCTCA ACCAGGAGTT TAACCAGACG
GTCATCTTTG TCACGCATGA TGAGGAATTC GCCCGCAGAG CGAAGCGGCG CATACATCTT
GTGGATGGAA AAATTGATAA GTAG
 
Protein sequence
MSTTILKLVA VRKELELSRD IRQTIIPGLS LEVEEGEFIS ITGPSGSGKS TLLYIMGGLD 
KPTFGEVWLD GVNISDKNEK EMSKIRNEKI GFIYQFHFLL PEFTAVENVS MPMMINSTRT
KAEIRQRAQM LLDKVGLSDR YDYRPSQLSG GQQQRVAVAR SLANEPKLVL GDEPTGNLDS
KSGNQVYELF EQLNQEFNQT VIFVTHDEEF ARRAKRRIHL VDGKIDK