| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0460 |
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| Symbol | |
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| ID | 6374124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 482388 |
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| End bp | 483161 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642682978 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001958905 |
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| Protein GI | 189499435 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.129082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGAAA TCCTGAACAA AACCTTATTC TTTGTAATGA CATCGTCCGG AAAAAAAGTA
TGCTTCATCA CCGGCGGTTC CGGTCGCCTT GGCAGCGAGG TAGCCTTATC ACTGGCTCAA
CTGGGATATT CCGTTTTCTT CACCTACAAC CGTTCCCGGG AAAAAGCGGA AAAAACACTT
GACAGGCTCC GCGACTTCAC GCCACAATCG GCAATGACAA GATGTGATGT CTCAAAGGTC
TCTGCTATCG AACAAGCCTT CGAACTTTTC AGCAAGCAGT TTTCCAGGCT TGACCTGCTG
ATCACCAGCG CGTCAAACTT TTACAGCACC TCATTGCCTG ACGTTACTGA AACCCAGTGG
GGGGACCTTG TAGACACAAA TCTGAAGGGG ACCTTTTTCA CCATGCAGAT CGGGGCCAGG
CTGATGCAAA AACAGCCTTT TGTATCAAGA ATCATTACCA TGACCGATAT TTCCGCGAAC
CTTGTCTGGC AACAATTCGC CCCCTATACC GCTTCTAAAA ACGCTGTCCA GCATCTTACA
AGAGTGTTTG CAAAAGCGTT TGCCCCGAAA ATTCTTGTGA ACTCAATCGC TCCCGGAACG
GTTACGATAA ACCCTGAATG GAATGACGGC CCGGAAGAGG AGCTGTCAAA AATGATCCCT
TTGCAGCGTA TCGGAGAACC TGAGGATATC GTTGAAGCCA TTGTATTTCT TACAAAAAGC
CGCTACGTAA CCGGACAGGT CATTACCGTT GATGGCGGAA GGATATTACG CTGA
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| Protein sequence | MREILNKTLF FVMTSSGKKV CFITGGSGRL GSEVALSLAQ LGYSVFFTYN RSREKAEKTL
DRLRDFTPQS AMTRCDVSKV SAIEQAFELF SKQFSRLDLL ITSASNFYST SLPDVTETQW
GDLVDTNLKG TFFTMQIGAR LMQKQPFVSR IITMTDISAN LVWQQFAPYT ASKNAVQHLT
RVFAKAFAPK ILVNSIAPGT VTINPEWNDG PEEELSKMIP LQRIGEPEDI VEAIVFLTKS
RYVTGQVITV DGGRILR
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