| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0456 |
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| Symbol | ispH |
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| ID | 6374120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 480075 |
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| End bp | 481052 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642682974 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001958901 |
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| Protein GI | 189499431 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.634747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAGTAC ATCTCGACAG AACATCATCA GGATTCTGTA TAGGCGTTCA GGGCACCATA
CATCTTGCGG AAGAAAAACT TGAGGAACTG GACAGTAAAC TCTACTGTCT GGGTGACATC
GTTCATAACG AGGTCGAGGT AAAACGCCTC GAGGACCTGG GACTGATCAC CATCGATAAT
GAAGAGTACA ACAAGCTCAA ACATGCTCAT GTGCTTGTTC GGGCTCATGG GGAACCGCCT
TCCACCTACA AGAGAGCCGA TAGCAACGAA TTGTCCATTA CCGACTCAAC CTGTCCGGTA
GTCTCGAAAC TGCAACGCAC AGCCAGGCTG CTTTTTGAAC TGGGGTTTCA GATAATCATA
TACGGCAAAA AAACACACCC GGAAGTTATC GGCATTAACG GTCAGTGTGC AGACCAGGCG
GTTATCATCA AGCACGCCGA CCTCTCCGTA CCAGAAGAAA CCGATCCGAT CGACTTTACA
CGGCAAACCG CTCTGATTTC ACAGACAACA ATGGATGTGC CGGGGTTTTA TATCCTGAAA
AAAAATCTTG AATCCCTTTT TGCCGACAGA ACCGATGCCG CAGAACAGAA GAGTACGCAC
TCATGGAAAA CCATACGTGA CATAGACATT ACGGCGGAAA TGACCGGCAT CTGCCCATTG
CCCGACTTAG TCTATAAAGA CACTATCTGC CGTCAGGTTT CAAGCAGAAA CGCCAAGCTG
CATGATTTCG CTGCCGCAAA TGACATAATA ATTTTCGTCG CGGGTAAAAA GAGCTCAAAC
GGACAGGTAC TCTTCAACAT CTGCAGAGAA TCCAATCCCC GCAGTTACTT TATCGCAGAT
CAAACAGGTC TTCAGGACGA GTGGTTTTAT GACAATGGTC GTCCGGTAGG CAGTGTGGGC
GTATGCGGGG CGACATCTAC GCCTATGTGG CTGCTGGAGA ACGTAGCGCA CTCTATTGAA
CAAACGTATG CCGGCTGA
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| Protein sequence | MKVHLDRTSS GFCIGVQGTI HLAEEKLEEL DSKLYCLGDI VHNEVEVKRL EDLGLITIDN
EEYNKLKHAH VLVRAHGEPP STYKRADSNE LSITDSTCPV VSKLQRTARL LFELGFQIII
YGKKTHPEVI GINGQCADQA VIIKHADLSV PEETDPIDFT RQTALISQTT MDVPGFYILK
KNLESLFADR TDAAEQKSTH SWKTIRDIDI TAEMTGICPL PDLVYKDTIC RQVSSRNAKL
HDFAAANDII IFVAGKKSSN GQVLFNICRE SNPRSYFIAD QTGLQDEWFY DNGRPVGSVG
VCGATSTPMW LLENVAHSIE QTYAG
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