Gene Cphamn1_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0454 
Symbol 
ID6374118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp477158 
End bp478063 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content50% 
IMG OID642682972 
ProductABC transporter-related protein 
Protein accessionYP_001958899 
Protein GI189499429 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.457213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTAT CATCACTGAA AAAAAAACTC GCAGGCGCGG AAGGTGATTT TCTGCTGCAC 
ACCGATGTTG AGATCGCCCG CGGAGGAATC ACGGCAATAG CAGGACCTTC AGGCAGCGGA
AAAACAACAT TTTTGCGAAT GCTCTCCGGA TTGACCACTC CTGACGAAGG CTTGCTGGAG
GTTGACGGAG AGGTGTGGTT TCGGAAAGAG CCGGGGAAAA AAACGGTAGT GAATCTCAAA
CCGCAGCAGC GGAAGGCAGG AGTGGTTTTT CAGGGGTATG CACTCTTTCC GCACATGTCG
GTACTGGGAA ATATGCTCTA TGCGTCGCGT GACATGGTTC TGGCCGAAAA GCTTCTGCAC
ATGACCGGCC TGCAGCAGCT GAAGCATGTA AAACCGGGAA ATCTGTCTGG TGGCCAGAAA
CAGCGGGTGG CTCTTTGCCG GGCGCTTATG CAGCAACCAC AGCTGCTCCT GCTTGACGAA
CCGCTTTCGG CTCTCGATGA AGCCATGAAA TCAGTTCTGC AGGATGAACT GATCAACGTG
AACCGGGAGC TTGGAGTAAC CATACTTATC GTAACGCATG ATTCAAGCGA AATGTACAAG
TTGTGTGATC GTGTTCTTCT TTTTGATACA GGGAGAATCA TCACTGACAC GTCACCTCGT
GAACTTTTTG TCGAGCGTGC TACAACGCAG AAGTTTGCCT TCAAGGGAGA AATTCTTGAA
ATACTCGCGG TCGATGCGGT CTCTATAGCT GTCGTTGCGA TAGGCAACAA CCTTGTTGAA
GTGGTCATCG ATTCGGATGA AAAAGAAACC CTTAAGGCTG GCGATATTGT TATTGTCGGC
ACGAAAGCGT TCAATCCTAC AGTGCGGAAG ATTGCTGCAA AGGATTTTGA CTTTTCACGG
CTTTGA
 
Protein sequence
MLVSSLKKKL AGAEGDFLLH TDVEIARGGI TAIAGPSGSG KTTFLRMLSG LTTPDEGLLE 
VDGEVWFRKE PGKKTVVNLK PQQRKAGVVF QGYALFPHMS VLGNMLYASR DMVLAEKLLH
MTGLQQLKHV KPGNLSGGQK QRVALCRALM QQPQLLLLDE PLSALDEAMK SVLQDELINV
NRELGVTILI VTHDSSEMYK LCDRVLLFDT GRIITDTSPR ELFVERATTQ KFAFKGEILE
ILAVDAVSIA VVAIGNNLVE VVIDSDEKET LKAGDIVIVG TKAFNPTVRK IAAKDFDFSR
L