Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0454 |
Symbol | |
ID | 6374118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 477158 |
End bp | 478063 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642682972 |
Product | ABC transporter-related protein |
Protein accession | YP_001958899 |
Protein GI | 189499429 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.457213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGTAT CATCACTGAA AAAAAAACTC GCAGGCGCGG AAGGTGATTT TCTGCTGCAC ACCGATGTTG AGATCGCCCG CGGAGGAATC ACGGCAATAG CAGGACCTTC AGGCAGCGGA AAAACAACAT TTTTGCGAAT GCTCTCCGGA TTGACCACTC CTGACGAAGG CTTGCTGGAG GTTGACGGAG AGGTGTGGTT TCGGAAAGAG CCGGGGAAAA AAACGGTAGT GAATCTCAAA CCGCAGCAGC GGAAGGCAGG AGTGGTTTTT CAGGGGTATG CACTCTTTCC GCACATGTCG GTACTGGGAA ATATGCTCTA TGCGTCGCGT GACATGGTTC TGGCCGAAAA GCTTCTGCAC ATGACCGGCC TGCAGCAGCT GAAGCATGTA AAACCGGGAA ATCTGTCTGG TGGCCAGAAA CAGCGGGTGG CTCTTTGCCG GGCGCTTATG CAGCAACCAC AGCTGCTCCT GCTTGACGAA CCGCTTTCGG CTCTCGATGA AGCCATGAAA TCAGTTCTGC AGGATGAACT GATCAACGTG AACCGGGAGC TTGGAGTAAC CATACTTATC GTAACGCATG ATTCAAGCGA AATGTACAAG TTGTGTGATC GTGTTCTTCT TTTTGATACA GGGAGAATCA TCACTGACAC GTCACCTCGT GAACTTTTTG TCGAGCGTGC TACAACGCAG AAGTTTGCCT TCAAGGGAGA AATTCTTGAA ATACTCGCGG TCGATGCGGT CTCTATAGCT GTCGTTGCGA TAGGCAACAA CCTTGTTGAA GTGGTCATCG ATTCGGATGA AAAAGAAACC CTTAAGGCTG GCGATATTGT TATTGTCGGC ACGAAAGCGT TCAATCCTAC AGTGCGGAAG ATTGCTGCAA AGGATTTTGA CTTTTCACGG CTTTGA
|
Protein sequence | MLVSSLKKKL AGAEGDFLLH TDVEIARGGI TAIAGPSGSG KTTFLRMLSG LTTPDEGLLE VDGEVWFRKE PGKKTVVNLK PQQRKAGVVF QGYALFPHMS VLGNMLYASR DMVLAEKLLH MTGLQQLKHV KPGNLSGGQK QRVALCRALM QQPQLLLLDE PLSALDEAMK SVLQDELINV NRELGVTILI VTHDSSEMYK LCDRVLLFDT GRIITDTSPR ELFVERATTQ KFAFKGEILE ILAVDAVSIA VVAIGNNLVE VVIDSDEKET LKAGDIVIVG TKAFNPTVRK IAAKDFDFSR L
|
| |