| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0444 |
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| Symbol | |
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| ID | 6374108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 470172 |
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| End bp | 470810 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642682962 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_001958889 |
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| Protein GI | 189499419 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0155755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.700123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGTTTT CCGGTATACT CATGCTTCGG GCATGTGAGA GCAGTAACAT TTCCTTAGAG
CAGGTAAATC AACAAAGATT GAAGCGAAAC GGGCATTCAA TACAGGAAGA TGATTTCAGT
ACCATCGTGG CTGAGCACCA GGATATGGTG CTCAATACCT GTTTTCGTTT TGTGCTGAAC
AGGGAAGACG CTGAAGATAT CGCTCAGGAA GTGTTTATTG AGGCGTATCG CTCGCTTGAG
AACTTCAGAA AGGAATCAAA GCTATCAACC TGGCTCTACA GGATCGCCGT CACCAAATCG
CTTGACCATC TCCGAAAGAA AAAAAGAAAA AAAAGATTTT CCTCTCTGAA ACGGGTAATC
GGTCTGCATG ACCCGACCGA AGAACTTGCG CTTCCTTCAT CTACAGCAAC ACCTGAGGAA
GTACTCTCGG GAAATGAAAG AACAGAGATT CTTCAGGACG CGCTCAGTTC ACTTCCTGAC
AATCAGAAAA CGGCCTTTCT TCTCAGCAAA TACGACGGCT ACTCCAATCA GGAAATCGCC
GATATCATGC AGACAACTGT CTCGGCGGTT GAATCTCTGG TTCACCGGGC AAAAAAAAGC
CTTCAGAACA AACTGGAAAA GCACTACAAA AAACAATGA
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| Protein sequence | MMFSGILMLR ACESSNISLE QVNQQRLKRN GHSIQEDDFS TIVAEHQDMV LNTCFRFVLN
REDAEDIAQE VFIEAYRSLE NFRKESKLST WLYRIAVTKS LDHLRKKKRK KRFSSLKRVI
GLHDPTEELA LPSSTATPEE VLSGNERTEI LQDALSSLPD NQKTAFLLSK YDGYSNQEIA
DIMQTTVSAV ESLVHRAKKS LQNKLEKHYK KQ
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