| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0424 |
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| Symbol | rho |
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| ID | 6374086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 448179 |
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| End bp | 449468 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642682941 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001958870 |
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| Protein GI | 189499400 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00623615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0254414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATA ATTCAGTTTC AAAAGGTCTG GACATCAACA TGCTCCAGAA GAAGAAGGTG
CATGAGTTGA ATACGTTAGC GAAAGAGTTT GGTGTAGTCA ATGCCGGTTT ACGAAAAGAA
GAGCTGATAT ACAAAATTAT CGAGGCGCAG TCCCAGAAAG GAAGCAGTAC GGAAAGCGGG
CAGGTGATGG TCAATACGGG TGTTCTTCAG GTTATTCCCG AGGGCTACGG TTTTCTTCGT
TCCTCCAACT ACAACTACCT CTCATCTCCG GACGATATTT ATGTGTCGCC ATCACAGATC
AAGCGGTTTA ACATGAGAAC CGGGGACACG GTGTCCGGTC AGGTCCGGGC GCCAAAAGAA
GGGGAACGAT TTTTCGCGTT GCTGAAAATC AACACCATTG ACGGCAAAGA TCCCGAGATT
ACCAGAGAGA GACCGTTTTT TGAGAACCTT ACCCCGCTGT TTCCCCGTGA ACGTTTGATT
CTTGAAACTT CACAGAATGA GCATTGCGGG AGAATTATGG ACATCTTTAC ACCGATCGGT
AAGGGACAGA GAGGTGTGAT CGTGGCTCAG CCCAAGACCG GTAAGACCAT GTTTCTCCAA
ACGGTGGCAA ATGCAATCAT TAAAAACCAT CCTGAGGTAT ATCTCATTGT TCTGCTTATA
GATGAACGTC CTGAAGAGGT TACGGACATG CAGCGAAGTG TTCCTGCGGA AGTTGTCAGT
TCTACGTTCG ATGAAGACCC GGAGCGTCAT GTACAGGTTG CCGATATGGT GCTTGAAAAG
GCAAAACGTC TTGTCGAAGT CGGTAATGAT GTCGTTATAC TGCTTGACTC TCTCACCCGT
CTGGCAAGAG CTCACAATAC CATTATTCCT CATTCCGGCA AGATTCTTTC CGGAGGCATC
GACGCAAATG CGTTGACGAA ACCAAAAAGA TTTTTCGGCG CTGCAAGAAA TATTGAAGAA
GGCGGCAGCC TGACCATCAT AGCAACCGCA CTTGTCGATA CAGGTTCAAG GATGGACGAT
GTTATCTTTG AAGAGTTCAA GGGAACGGGT AACATGGAGC TTGTTCTTGA CCGCCGTTTG
TCGGAGCGTC GTATGTTTCC TGCAATTGAT ATTCTGCGAT CCGGCACCAG AAAGGAAGAG
CTGTTGTTTA CGCAGCAGGA ACTCTCAAGA ACCTGGCTGC TGCGTAAATA TCTGGCAGAT
AAAAATCCAA TCGAGTGTAT GGAGTTCATG CGTGAAAAAA TATCCGACAC CAAAGATAAC
AAAGAGTTTT TCAAACATAT GAATGCTTAG
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| Protein sequence | MSNNSVSKGL DINMLQKKKV HELNTLAKEF GVVNAGLRKE ELIYKIIEAQ SQKGSSTESG
QVMVNTGVLQ VIPEGYGFLR SSNYNYLSSP DDIYVSPSQI KRFNMRTGDT VSGQVRAPKE
GERFFALLKI NTIDGKDPEI TRERPFFENL TPLFPRERLI LETSQNEHCG RIMDIFTPIG
KGQRGVIVAQ PKTGKTMFLQ TVANAIIKNH PEVYLIVLLI DERPEEVTDM QRSVPAEVVS
STFDEDPERH VQVADMVLEK AKRLVEVGND VVILLDSLTR LARAHNTIIP HSGKILSGGI
DANALTKPKR FFGAARNIEE GGSLTIIATA LVDTGSRMDD VIFEEFKGTG NMELVLDRRL
SERRMFPAID ILRSGTRKEE LLFTQQELSR TWLLRKYLAD KNPIECMEFM REKISDTKDN
KEFFKHMNA
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