Gene Cphamn1_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0403 
Symbol 
ID6374065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp429132 
End bp429482 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content47% 
IMG OID642682920 
Productribosome-binding factor A 
Protein accessionYP_001958849 
Protein GI189499379 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000114311 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.233989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTC GTACCGAAAA AGTTGCCTCT CTGCTGCAAA AGGAGTTGAG TGCGATTTTT 
GAAAAAGAGC TTCCCAGAAG TGGACCCCTT ATGACGGTCG TGCAGGTTAA AGTGACAACT
GATCTTGGGA TCGCAAGAGT ATACGTGTCC ATTATCGGCA GTGAAAAAGA GCGTAAAACA
GCCATTGCAC ACCTGCAGAA TGAGACCAGA TACATTCGAA AGCTGCTTTC CGCGAAGATA
CGACACCAGT TCCGCCGGAT ACCGGAACTG GAATTTTACG AAGACCGGCT ATACGAGAAG
GCTGAAAGAA TAGATCTGCT GATCAAACAG GCTCTTGGCA CCTCAAAGTG A
 
Protein sequence
MTIRTEKVAS LLQKELSAIF EKELPRSGPL MTVVQVKVTT DLGIARVYVS IIGSEKERKT 
AIAHLQNETR YIRKLLSAKI RHQFRRIPEL EFYEDRLYEK AERIDLLIKQ ALGTSK