Gene Cphamn1_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0400 
Symbol 
ID6374062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp424099 
End bp424641 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content49% 
IMG OID642682917 
Productprotein of unknown function DUF150 
Protein accessionYP_001958846 
Protein GI189499376 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00158996 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.629594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTGA TAAAAGACAG GTTGCTGGCG TTTATAGAGG ACTCTTTTGA AGAGTATTCA 
ATTGAGAGAA GCGCTTCCGG CGAGCCGGAT GTTTTTCTTG TTGCTCTTCT TGTGAAAGGG
ACGCTTCCGT CACGAAGGGT GGAAGTTCTT GCCGAGACAG ACTCCGGTAT TTCGGTTACC
CGGTGCATGT CTATAGCGCG TTGGCTGAGA AATGCTTTTG AAGAGAATGA AGAGATAAGA
AATCTGGTTG GTGAAGATTA CGGGCTGATG GTCTCATCTC CCGGTATCGG TGAACCGATT
CAGCATGCCC GGCAGTATAT TCGCCATAAG GGTCACCTGC TTCGGGTCCG ATATACAGAT
GCAGGTGATG CTGAGCACGA AGTTTCCGGA AGGCTTGTCG AGGTGGAAGT TGTTGAAACA
ACAAGTCCGT TTATTGTACT TGAACCGGAA AAGGTATCGA AAGGCAGAAA ACGGGAACGT
CTTGAACCGG TACGGTTGGA GCTCAACCGG ATCAAGAGCG CTGTAGTTGA AGTTGAGTTC
TGA
 
Protein sequence
MNVIKDRLLA FIEDSFEEYS IERSASGEPD VFLVALLVKG TLPSRRVEVL AETDSGISVT 
RCMSIARWLR NAFEENEEIR NLVGEDYGLM VSSPGIGEPI QHARQYIRHK GHLLRVRYTD
AGDAEHEVSG RLVEVEVVET TSPFIVLEPE KVSKGRKRER LEPVRLELNR IKSAVVEVEF