Gene Cphamn1_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0388 
Symbol 
ID6374050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp413006 
End bp413818 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content45% 
IMG OID642682906 
Productglycosyl transferase family 2 
Protein accessionYP_001958835 
Protein GI189499365 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0108663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAA CAAAGCCACT GAGCTGCAGC CTCATAATAA CAACCTATAA CTGGCCGGAA 
GCACTTGAAC TGGCGGCAAG AAGCGCTTTG CGGCAATCGC TGGCGCCTGA CGAAATCATC
ATAGCTGATG ACGGCAGCGA TACTGACACG AAAAAATTTG TTCGGGGCCT TTCCGAAAAT
GCATCAGCCC CGATAATTCA TTCCTGGCAG GAAGACAAAG GGTTCAGAGC CGCATCCTCC
AGAAACAAGG CGATAGCTCT CGCAAAAAGC CAATACATTG TATTGATCGA TGGCGACATG
ATCCTGCACA GGGATTTCAT ACAAGATCAT ATGCGTTCAG CAAAAAAAAA CCACTTCATA
CAAGGCTCAA GAGTACTTCT CAATGAACAC ACGTCAATAA AAACGCTTAC CACGAGAAAG
ATCACTTTCG GCTTCTTCGA CAAAGGATTA CAGAACAGAA TTAACGCGGT GCACAACAAT
GCAATAGCCA GCTTCTTTAG AAGCACCCAT AACACGTTTC AAGGGATAAA AACGTGTAAC
ATGTCTTTTT TCCGGGAAGA TTGCATCAGG ATAAACGGGT TCAATGAGGA TTTTATCGGA
TGGGGGCGGG AAGACAGTGA GTTTGCCGCG AGACTTTTTA ACAGCGATGT TCATCGTATT
TCACTTAAAT TCGGTGCGAT AGCCTATCAT CTCTGGCACA GGGAAAACCC GAGAGATTTC
CTTCCGGCAA ATGACAGACT ACTTGACCGA ACAATTACCG GGCGCCTGAA AAGATGTAAA
AACGGTATAG ATAAATATCT AACGGACAAG TAA
 
Protein sequence
MKQTKPLSCS LIITTYNWPE ALELAARSAL RQSLAPDEII IADDGSDTDT KKFVRGLSEN 
ASAPIIHSWQ EDKGFRAASS RNKAIALAKS QYIVLIDGDM ILHRDFIQDH MRSAKKNHFI
QGSRVLLNEH TSIKTLTTRK ITFGFFDKGL QNRINAVHNN AIASFFRSTH NTFQGIKTCN
MSFFREDCIR INGFNEDFIG WGREDSEFAA RLFNSDVHRI SLKFGAIAYH LWHRENPRDF
LPANDRLLDR TITGRLKRCK NGIDKYLTDK