| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0385 |
|---|
| Symbol | |
|---|
| ID | 6374047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 407505 |
|---|
| End bp | 409538 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642682903 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001958832 |
|---|
| Protein GI | 189499362 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases
[COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACCA TAGGCATAAC CGGAGCTGGT GGAGGAGTAG GACAGTCTAT TCTTCACGCT
CTCAGCCAGT CAACTCTGGA ACTGAAGATT GTCAGCATGG ACGCAAGCCC GAGAAGTATC
GGCATGTTCT GGTCAGATGA CTCCTGGCTG CTCCCAAAAG TCAGTCAGGA GGAAAGCTAT
ATCAAGAGCC TCCTGGATAT CTGTAACCAT GAAAATCTTG ATATCATTAT TCCCGGGCTC
GATATTGAAC TCCCTGTTCT TTCCCGCCAC CGTGATACGT TTCTGCAGCA CGGCTGCAAA
GTCATTGTCG GCAGCAAGGA AGCCGTCAGC ATCTGTCGCG ATAAATTCAG GCAATCCGTT
TTCTGCAGAG AAAAAAATCT TCCGTTTGTA AAAACCTGCT CTCTTGAAGA TGCAAGAAAA
ATGCCGGACA GCTTTGACTA CCCGGTAATC GTCAAACCCA GAGGAGGATC AGCGTCAGCC
GGGGCCTCAC TTGTCTTCAA CCCTGATCAG CTCTACCAGA TACCGGATGA CCAGCCCATG
ATCGTTCAGG ACTATCTCCC TCCAAACGAC AGCGCAAGCA GATCGTTTTC GGGAAAAACC
TCTACGGGCA ATCTCGATCA GTCAAACGAA ATATCCGTCC AGTACTATAT CAACCGGTCC
GGCAATGTAT CCGGCAGTTT TGCAAGCGTA AACCTTCTGA AAAACGGAAT TCCGGTAGAA
ATCAGCCCTG AGCCGGACAG TCCGGCCATC GCTGCAGGAC TGCCTATCGT CAAGGCTCTG
GCCCAAGAGG GTCTTACCGG GCCGGTAAAT CTCCAGGGAC GGCAAAAAGA CGGGGATATC
CTGTTTTTTG AGATCAACGC AAGATTTACC GGAATCACAG GGCTCAGAGC ATCTTTTGGC
TATAAAGAGG TTGAAGCCGC AATTTGTGAT CTTCTCTTTG ATTCAGATAA AGATGTCGAA
GCGCTTCTTG GCTATCTGCC CGGCTATTTC GGTCTCAGGT ATGTCGCGGA CAGCATCGTT
CCGGTCGAGA GGATGAACAG GCTCTGTTTG CCGAATCATG GGAAAACACC ATCCCGCGGA
TCCTCAAGTG CGCCCTCCTC AGAAAATATT CTCGTAACCG GCGCCTCAGG CTATTTTGGG
GCCGCTATTA TCGAGCAGCT GCTCGATGTA CAGAAAGGAC ATACAATTAC AGCTCTGGCA
AGAACCGATC ACGCCGAAAC GGGACTTGTC AACACATTTG GAAATCACAA CAATTTTGCG
TGTGTCCGGG GTGAATTTCC AGGATCCATA CCGGATCTGC AGGGAATGGA CACGGTAATA
CACGCGGCAT CACTCCGCCC GGGATCCGAC CCGTCTCCTC TGTTTCTGAC AAACACAGAT
GGCACAAGAG CATTGCTTGA AGCGATGCAC GATGCCGGAG TAGGAAAACT CATCTTCATT
TCATCTCAAT CCGTATACGG AACAGCAAGA ACGCCTCTAT GGAAAGAAGA AATGCCTGCA
AAGCCTGAAA CCCCATATGC CTTGAGCAAA TGGATCGGAG AACTTCTGAG CCTCAGTGAG
AACTACAGCA TTCCTCAGGT AATTATTCTG AGAGTCGCTC GCATCTATGG ATTGGGGCAC
TTTGTTCGAT GGGATGAACT TCCTCACAAG TTCGCCCTGA ATGCCGCAAA GAAGCGGGCG
CTCCCTCTAT TCGGCAGCAA AAACCGGATA GACCTGCTAC ATGTTAACGA TGCTGCGCGC
GCTGTACGTG CTTCATGCTG CACATCATTT CCTGAAACCA GCAAAATAAT TCTCAACATC
GGAAGCGGCA CACCGGTCTC GATCTCGGAT TTTGCCTCGA TCTGCCAGGC CGCGTCGAGA
AACTGCGGAC TTCCGGCGCC GCCTATAGAA CAGAACCAAA ACGACGAAGC TTCACCACTA
TACTGGGGAA TGGATATCCG GAAGGCAAAG GAGAGCCTCG GCTGGGTTCC CCGCCACTCA
CTGCAGAGCG GCATGGAAGA GCTTATCAGG TATCAGCTTG ATAATGCAGA ATAA
|
|---|
| Protein sequence | MITIGITGAG GGVGQSILHA LSQSTLELKI VSMDASPRSI GMFWSDDSWL LPKVSQEESY
IKSLLDICNH ENLDIIIPGL DIELPVLSRH RDTFLQHGCK VIVGSKEAVS ICRDKFRQSV
FCREKNLPFV KTCSLEDARK MPDSFDYPVI VKPRGGSASA GASLVFNPDQ LYQIPDDQPM
IVQDYLPPND SASRSFSGKT STGNLDQSNE ISVQYYINRS GNVSGSFASV NLLKNGIPVE
ISPEPDSPAI AAGLPIVKAL AQEGLTGPVN LQGRQKDGDI LFFEINARFT GITGLRASFG
YKEVEAAICD LLFDSDKDVE ALLGYLPGYF GLRYVADSIV PVERMNRLCL PNHGKTPSRG
SSSAPSSENI LVTGASGYFG AAIIEQLLDV QKGHTITALA RTDHAETGLV NTFGNHNNFA
CVRGEFPGSI PDLQGMDTVI HAASLRPGSD PSPLFLTNTD GTRALLEAMH DAGVGKLIFI
SSQSVYGTAR TPLWKEEMPA KPETPYALSK WIGELLSLSE NYSIPQVIIL RVARIYGLGH
FVRWDELPHK FALNAAKKRA LPLFGSKNRI DLLHVNDAAR AVRASCCTSF PETSKIILNI
GSGTPVSISD FASICQAASR NCGLPAPPIE QNQNDEASPL YWGMDIRKAK ESLGWVPRHS
LQSGMEELIR YQLDNAE
|
|---|
| |