| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0371 |
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| Symbol | |
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| ID | 6374033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 391883 |
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| End bp | 393697 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642682890 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001958819 |
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| Protein GI | 189499349 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCAGA AAACAATGCT TTCGCTGCCC TTAAGGGTAA AGCAGACTCT TGCGGTTATG
CAGGATAGTC TGGCGGTAGT GTTTTCCGTA TGGCTCGCCT ATTCGCTTCG TTTTGAGGTA
TGGCATGTTC CTCAAAAAGC ACAATGGCTG GTATATGGTA TCGCTCTGGC TATTTCTCTG
CCTGTTTTTT ATGGCACCAG CCTCTACAAG TCAGTCTTTC GCTTTAGTGA GGCTATGGCA
TTTAAGCAGA TAACAAAAGC TGCGGCACTC TATGCGGTGC TGTTTTTTTT TACTCTTGTC
TTGTTCAAAA TAGATGGGGT CCCGCGTTCA ATCGGAATAA CGCAGCCAAT AATGCTTTTT
CTGCTGCTTC TCGCAAGCAG AGGCGCAGCC CGTTTTTTTC TGAACACCCG CTTGCAGTTG
GGTCATTGCA GTACTGCCGA CAAGCGGTTG CTGATCTACG GTGTCGGATC GGCAGGAATT
CAGCTCGCGT CAGCCATCGA ACAAACTACC CGCCACCTTC TTATCGGTTT TATCGATGAT
GATCCCAAAC TGCATGGACG GATGGTAAAA GGCCTGAAGG TATTTTCTTT TGGCCAGGTG
GCCCGGCTTG TAGAACAGGC GACGGTTACC GACATTCTGC TGGCGATACC CTCTGCAAGC
CGTTCAAGGC GCAATCAGAT TTTGCAGGCG TTACAGCCGT TTCCCGTGCA CGTGCAGACA
CTTCCAAGCC TTGAGGATTT GACAGATGGC AATATTTCAG TCAGAGATGT AAAAGAGATT
GAAATTGAAG ACCTGCTTGG CCGTGATCCT GTTTCTTCCG GGCCATCTCT TTTCAGGCGT
AACATTACCG GCAAGACCGT AGTTGTAACC GGTGCGGGGG GGAGTATCGG GAGAGAGTTG
TGCAGGCAGA TACTTATCGG GTGCGCCGAT AAGCTCATTA TGATTGATCA TGCTGAATTC
AATCTGCATG ACGCATATCT CGAGCTGGAA GGGTACAGAG AAAGAAAACA GCAGGACACG
GAGATTGTGC CTCTTTTGTG CAATGTGGCC GAGAACCATC GATTCAGCGC AATCTGCTCT
TCATATCACC CGCATACCAT TTACCATGCT GCGGCGTACA AACATGTTCC CATGGTTGAG
CGCAATCCTG TCGAAGGCGT TCGGAATAAT GTTTTCGGGA CTCTTCGTTC AGCTCTTGCC
GCGCAGGAAT ACGGCGTTGA AAGTTTTATC CTGGTCAGTA CCGATAAGGC TGTTCGTCCA
GCAAATTTCA TGGGGGCGAG CAAGCGATTG TGTGAGATTA TTCTTCAGGC GCTATCTGCT
GAAGAGAACG GTAGCGGCAC GTGTTTCTCT ATGGTCCGTT TTGGTAATGT GCTGGATTCA
AGTGGTTCTG TAGTGCCGCT TTTTCGCCAG CAGATAAAAG ACGGCGGGCC TGTAACCGTA
ACACATCCGG AAATAACCCG ATATTTTATG ACTATTCCGG AAGCTGTGCA GCTTGTTATT
CAGTCAGGCG CGATGTCTCT GGGCGGAGAG GTTTTTGTCC TTGATATGGG TGAGCCTGTC
AAGATAATTG ATCTTGCGAA ACGCATGATC GGATTGTCAG GTTTAACGGT ATTGGACAGG
AATAACAGAA AAGGTGATAT TCCTATAGAA GTAATCGGCC TGCGTCCGGG GGAAAAGCTC
TATGAAGAGC TGTTGATAAG CGGCGATCCT CAGCCGACTG ATCACCCGAG GATATTCAAG
GCGCATGAAG AGTTTATTGC ATGGCCGGCA CTTCAGGATG AACTTTCGGA GATGGAGCAG
GTTCTTAATA CCTGA
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| Protein sequence | MLQKTMLSLP LRVKQTLAVM QDSLAVVFSV WLAYSLRFEV WHVPQKAQWL VYGIALAISL
PVFYGTSLYK SVFRFSEAMA FKQITKAAAL YAVLFFFTLV LFKIDGVPRS IGITQPIMLF
LLLLASRGAA RFFLNTRLQL GHCSTADKRL LIYGVGSAGI QLASAIEQTT RHLLIGFIDD
DPKLHGRMVK GLKVFSFGQV ARLVEQATVT DILLAIPSAS RSRRNQILQA LQPFPVHVQT
LPSLEDLTDG NISVRDVKEI EIEDLLGRDP VSSGPSLFRR NITGKTVVVT GAGGSIGREL
CRQILIGCAD KLIMIDHAEF NLHDAYLELE GYRERKQQDT EIVPLLCNVA ENHRFSAICS
SYHPHTIYHA AAYKHVPMVE RNPVEGVRNN VFGTLRSALA AQEYGVESFI LVSTDKAVRP
ANFMGASKRL CEIILQALSA EENGSGTCFS MVRFGNVLDS SGSVVPLFRQ QIKDGGPVTV
THPEITRYFM TIPEAVQLVI QSGAMSLGGE VFVLDMGEPV KIIDLAKRMI GLSGLTVLDR
NNRKGDIPIE VIGLRPGEKL YEELLISGDP QPTDHPRIFK AHEEFIAWPA LQDELSEMEQ
VLNT
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