| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0366 |
|---|
| Symbol | |
|---|
| ID | 6374028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 382198 |
|---|
| End bp | 383427 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642682885 |
|---|
| Product | phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase |
|---|
| Protein accession | YP_001958814 |
|---|
| Protein GI | 189499344 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
|---|
| TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.593755 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA ACGATAAAAA CATACTGCTT GGCGTCTGCG GAGGCATTGC AGCCTACAAG
ATACCGCTTC TTATCAGGCT CCTGAAAAAA CAGGGCGCCA ATGTACGCGT CGTCGTCACC
AGAGCAGCAA CCCGGTTTGT CACTGAACTC ACGCTTTCAA CGCTTTCACA GGAACCGGTC
TGCCAGGATA TTTTTCCGGA TGGCTCCTCT ACAGATGAAT GGACAAGACA CATCGCTATC
GGAGAATGGG CTGACGCCTA TGTTATTGCG CCTGCAACGG CCAATACCAT TGCAAAACTT
GCCGCGGGAA TCTGTGACGA TATGCTTTCC GCCTCTTTCA TCACGCTTCG TCCCAATAAG
CCGAAACTCC TGTTTCCCGC TATGGACGGA GAAATGTTCG AGTCGGCCTC CGTTCAAAGA
AACCTTTCCT GGCTTTCAGA GCAGGGATGC ATCGTTGTCA ATCCTGAAAG CGGTCAGCTC
GCATCTGGCC AGTGCGGCAC AGGAAGAATG CCCGAACCGG AAACAATAAC AGACGTGATC
GAACAAGCAG TTACGATTAC ACAAAATGAC TCGGTATTGC GAGGAAAATC GGTGGTGATA
ACCGCCGGGC CTACAAGAGA AAAAATTGAT GATGTTCGAT TTATTTCAAA CTATTCATCA
GGCAAAATGG GCTTTGCCCT TGCGAAAGCT GCCGCAGCAA AAGGTGCGGA GGTAACACTT
ATAACCGGCC CGGTACATCT GCATACTCCG GAAGGGGTCA CCCGTCTGAA TGTTGAAAGC
TCTGAAGAGA TGCAAAACGC AGTCAGAGAA CATCATACAT CCTGCGATAT CTTTATCGGA
GCTGCTGCCG TGGCTGATTA CAGGCCTGTC GAAGCTATTT CCGGAAAGTT CAGGAAGGAA
CACGAGACCA TGGAAATCAG TCTTGTGAAA AACCCCGATA TTCTTGCCGG TTTTTCCGAA
CAGAAAAAAG CACATCAGCT CGCAATCGGC TTCTCACTTG AAACCGCAGG AAATCTGGAT
CATGCGAAGG CAAAACTGAA GCAGAAAAAG CTTGATCTGA TTGCCTATAA TACCTTTGAC
GGTAAAACGT CGGGGTTTGA GGTTGACACA AATATGCTGA CTCTGATAGA CAACAGCCTC
TCGATTCAGG AACTCCCTCT GCTCAGCAAG CAGAAAGCCG CCGAAAAAAT GCTCGATGCC
ATTGAAAAAC TCTTAAATAG TAGCAAGTAA
|
|---|
| Protein sequence | MKLNDKNILL GVCGGIAAYK IPLLIRLLKK QGANVRVVVT RAATRFVTEL TLSTLSQEPV
CQDIFPDGSS TDEWTRHIAI GEWADAYVIA PATANTIAKL AAGICDDMLS ASFITLRPNK
PKLLFPAMDG EMFESASVQR NLSWLSEQGC IVVNPESGQL ASGQCGTGRM PEPETITDVI
EQAVTITQND SVLRGKSVVI TAGPTREKID DVRFISNYSS GKMGFALAKA AAAKGAEVTL
ITGPVHLHTP EGVTRLNVES SEEMQNAVRE HHTSCDIFIG AAAVADYRPV EAISGKFRKE
HETMEISLVK NPDILAGFSE QKKAHQLAIG FSLETAGNLD HAKAKLKQKK LDLIAYNTFD
GKTSGFEVDT NMLTLIDNSL SIQELPLLSK QKAAEKMLDA IEKLLNSSK
|
|---|
| |