Gene Cphamn1_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0357 
Symbol 
ID6374019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp370824 
End bp371798 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content55% 
IMG OID642682876 
Productlipopolysaccharide heptosyltransferase II 
Protein accessionYP_001958805 
Protein GI189499335 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02195] lipopolysaccharide heptosyltransferase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0363758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCAT CTGTTATCCT TATGCCTAAC TGGATAGGAG ATCTGCTTCT CGCTCTTTCT 
GTCGTGATGA AGATGCCTGA GGAGAGATTG TCGGGAACAA CGCTGCTTGT TCCGCAGCAG
ATGACAGGTC TGGTCGGAGC GCTGAGCACA CTGCCTCATC TTCCCTTCGC CCGAAGTTCG
GCTGAGGAGC GCAGGCGAAC GGTTGAAGAG GTTCGTTGTC GCGGATTCCG GTCGATCTAT
CTCCTTCCGT TCTCATTCTC GTCCGCACTG TTTGCCGTAA AGACAGGAAT ACCCCACAGG
CGAGGACTTT CACGTGAGTT TCGCCGTCTG CTTCTGACCG ATCCTCTACC GGGGAAACTG
AGAGACAGGT CGCATCATAT TCTTCGTGAA TATGCGGAGA TCCTTCAGAC AGCATACGTT
TCTCCGGAGA AATGGGAGGG CGTGCCGGTT CCGCCGGAGA AGGCCTATCC GGGATCGATT
GTCTTCTGTC CCGGAGCGAA ATACGGACCG GCAAAGCAAT GGAACAATTT TCCCGATCTT
GGCCGGCAAC TGACTGCAGA AAGGATTGTT GTTCTGGGCA CAAATGAAGA GAGGGCTGCT
GCCGGGGAGA TTGTGCGGAG CGCGCCGGGC AGGGTTACCG ATTTGACCGG GAGGACATCG
TTACAGGAAG CTGCAGCTGT TATGTCAGCC GCCCGGGCGG TTGTTTCCAA TGATTCAGGT
CTGATGCACC TGGCTGGATT TCTCGGTGTG CCTGTGATCG GTATTTTCGG GTCGACAAGT
CCTGCATGGA CAAGGCCTCT TGGCAGACAT GCTGTTACTA TGAGCGGCTC CGAGCCTTGC
GCTCCCTGTT TCAGGCGGGA ATGCAGATAT GGCCACTACA GATGTCTGGA CGCGGTCACC
ACTGCTGATG TGATGACGGA AATCGCAAAA TTGTCCTCTC TCCACCCAAT CCCTCCCGGG
AAGAGAGGGA AATAA
 
Protein sequence
MAPSVILMPN WIGDLLLALS VVMKMPEERL SGTTLLVPQQ MTGLVGALST LPHLPFARSS 
AEERRRTVEE VRCRGFRSIY LLPFSFSSAL FAVKTGIPHR RGLSREFRRL LLTDPLPGKL
RDRSHHILRE YAEILQTAYV SPEKWEGVPV PPEKAYPGSI VFCPGAKYGP AKQWNNFPDL
GRQLTAERIV VLGTNEERAA AGEIVRSAPG RVTDLTGRTS LQEAAAVMSA ARAVVSNDSG
LMHLAGFLGV PVIGIFGSTS PAWTRPLGRH AVTMSGSEPC APCFRRECRY GHYRCLDAVT
TADVMTEIAK LSSLHPIPPG KRGK