| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0356 |
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| Symbol | |
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| ID | 6374017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 369040 |
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| End bp | 370431 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642682874 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001958804 |
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| Protein GI | 189499334 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00422176 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAG AACCAACAAA GATCCTGTTA CACGAGGATG AAATGCCTCG TCAGTGGTAC
AACATCCAGG CAGACCTTCC TACCCCTATA CCCTTACCCC TCGGCATGGA CGGCAAGCCG
ATCAATCCTG AAGACCTTGC GCCGGTCTTC CCCATGAACA TTATTGAACA GGAACTCAGC
ACCGAACGCT GGATTACCAT TCCCGAGAAG GTCCGGGAAC TTCTCACTCT CTGGCGCCCT
TCTCCGCTCT ACAGAGCCAA AGGCCTTGAA AAAGCACTGA ATACTCCAGC CAGGATCTAC
TATAAAAACG AAGGTGTTTC ACCAGCCGGG AGCCATAAAC CAAACACCGC TGTCGCCCAG
GCATATTACA ACAAGGAATT CGGCATCAAA TATCTGACAA CCGAGACCGG TGCCGGTCAA
TGGGGAAGCG CGCTTGCAAT GAGCTGCAAG CTTGTCGGCA TCGAGTGCAA GGTGTTTATG
GTGCGCATCA GCTTTGATCA GAAACCGTTC AGGAAAATCA TGATGAAAAC CTGGGGTGCC
GACTGCATTG CGAGCCCGAG CGAAACAACC GGGATCGGAC GTAAAATCCT GGCTGAACAG
CCGGACACTC CCGGAAGTCT CGGCATTGCG ATCAGCGAAG CTATCGAGGA AGCCGTCCAG
CGAGAGGATA CCCGCTACTC TCTCGGCAGC GTCCTGAATC ATGTCATGCT GCATCAGACG
ATCATCGGGC TGGAAGCACA GAAACAGTTC GACAAAATCA ACCGGTACCC GGATATCGTT
ATTGGCTGCG CCGGCGGGGG CTCCAACTTC GCAGGAATCA GTTTCCCGTT CATTCATGAT
AAAATCAACG GAAAAGATCT TCGTGTGATC GCAACCGAGC CCGAAGCCTG CCCGACCCTC
ACAAGAGGAC CGTATGTCTA TGACTCCGGA GACGTAGCGA AAATGACTCC TCTGCTTGCG
ATGCACAGCC TCGGTCACGG CTTTATCCCC CCTTCGATTC ATGCTGGAGG GCTTCGTTAC
CACGGTATGG CCCCACTGGT CAGCCATGTG CTGCAGCAAG GCCTTATTGA AGCAAACGCA
CTGCCGCAGA CTGAATGTTA CAAGGCTGCA CTGCTTTTCG CCCATACAGA AGGGTTCATT
CCCGCTCCGG AAACCTCGCA CGCTATCGCG CAAACTATAC GGGAAGCAAA CCGTGCACGC
GAAGAGGGAA AAGAAAAGAC TATTCTGATG AACTGGTCCG GTCATGGGCT CATGGACCTG
CAGGGATACG ACGCCTTCAT GTCGGGAAAA CTCGAAGACT ATCCTTTGCC GGAAGAACTC
CTGCAACAGT CGCTGGCGGA CATCAAGGAT CATCCGAAGC CACCCGTCTC TCCCTGTCAT
TCCCGTGCCT GA
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| Protein sequence | MSSEPTKILL HEDEMPRQWY NIQADLPTPI PLPLGMDGKP INPEDLAPVF PMNIIEQELS
TERWITIPEK VRELLTLWRP SPLYRAKGLE KALNTPARIY YKNEGVSPAG SHKPNTAVAQ
AYYNKEFGIK YLTTETGAGQ WGSALAMSCK LVGIECKVFM VRISFDQKPF RKIMMKTWGA
DCIASPSETT GIGRKILAEQ PDTPGSLGIA ISEAIEEAVQ REDTRYSLGS VLNHVMLHQT
IIGLEAQKQF DKINRYPDIV IGCAGGGSNF AGISFPFIHD KINGKDLRVI ATEPEACPTL
TRGPYVYDSG DVAKMTPLLA MHSLGHGFIP PSIHAGGLRY HGMAPLVSHV LQQGLIEANA
LPQTECYKAA LLFAHTEGFI PAPETSHAIA QTIREANRAR EEGKEKTILM NWSGHGLMDL
QGYDAFMSGK LEDYPLPEEL LQQSLADIKD HPKPPVSPCH SRA
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