Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0333 |
Symbol | |
ID | 6373993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 337284 |
End bp | 338927 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642682852 |
Product | N-6 DNA methylase |
Protein accession | YP_001958783 |
Protein GI | 189499313 |
COG category | [V] Defense mechanisms |
COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.175232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAACA ACAACGGTAA CGGAAAGTCG CTCGAATCCT GGATCTGGGA TGCGGCATGT TCCATCCGTG GCGCAAAAGA TGCACCGAAG TATAAGGAAT TCATCCTGCC GCTGATCTTT ACCAAGCGCC TGTGCGATGT CTTCGATGAT GAACTGAACC GCATTGCCGC CGAGGTTGGT TCACGCAAGA AGGCCTTCCA GCTGGTCAGA GCTGATCACA AGCTGGTCCG TTTCTATCTC CCCCTTGTTC CCTTCGATCC CGAGGAGCCC GTCTGGTCTG TTATCCGCAA GTTCTCCGAC AGGATCGGTG AAGGCGTTAC CACTCACATG CGAGCCATCG CCAGAGAAAA TCCGCTCCTG CAGGGCATCA TCGACCGCGT CGACTTCAAC GCCACCACGC ACGGCCAGCG GGATATCGAC GATGATCGCC TCTCCAATCT CATCGAAGCC ATCAGTACCA AGTGTCTCGG GCTTGATGAC GTCGAGGCTG ACATCATCGG CAAGAGCTAC GAATACCTCA TCCGCAAGTT CGCCGAAGGC GGCGGTCAGA GCGCGGGCGA GTTCTACACT CCCCCAGAAG TCGGCACCAT CATGTCCAGG GTGCTCGCGC CCGAACCGGG CATGGATATC TACGATCCCT GCTGCGGTTC CGGTGGCCTT CTTGTGAAAT GCGAGATCGC CATGGAAGAA AAACGGAGGG AGATAAAGGA GGGCGGACAT TCCTGTCCGC CATTACATTC TGAACTCAAT GGTTATCCTT CATGTAATGG CGGGTTGGAA AACCCGCCCT CCATTGCCCC TCTCAAGCTC TATGGTCAGG AATACATAGC CGACACCTGG GCCATGGCCA ATATGAACAT GATCATTCAC GACATGGAAG GTCAGATCGA GATCGGTGAT ACCTTCAAGA ATCCCAAATT CCGCAACAAA CAGGGTAAAC TCCGCACCTT CGACCGCGTC GTCGCCAATC CCATGTGGAA CCAGGACTGG TTCACCGAGG CCGACTACGA TAACGATGAA CTCGACCGCT TCCCCGCCGG GGCCGGATTC CCCGGCAAAT CTTCCGCCGA CTGGGGCTGG ATTCAGCACA TACACGCAAG CCTGAATAAC TCGGGCCGCG CCGCCATCGT CCTCGACACC GGGGCAGTCT CCCGCGGATC GGGCAATGCC GGCACCAACA AGGAAAAAAG CGTTCGCAAG TGGTTTGTCG ATAACGACAT CATCGAAAGT GTGCTCTACC TTCCCGAAAA CCTTTTCTAC AACACTACTG CTCCGGGTAT TGTCTTGTTC CTGAACAGGG ATAAAGAAAT AGAAAGAGAG GGTTGTGTGC TGCTCGTCAA CGCCAGCCGG ATCTTCGAAA AAGGTGACCC CAAGAACTTC ATTCCGGACG AGGGCATCAA GCGCATCGTC GATACCCTCA TCGGGTGGAA GGAGGAGGAA AAGCTCAGCC GCATCGTCAA TCTCGCCGAG CTGAAGAAGA ACGACTACAA CATTTCCCCC AGCCGCTACA TCCACACCGG AGAAGCCGAA ACCTACCGGC CCATTGAGGA TATCGTCAAG GATCTGAACG CCATCGAGCT GGAGGCAAGA GAAACCGATG AAGCCCTGCG GAAGATCCTC AAGCAACTGG GGGTGGATGT ATGA
|
Protein sequence | MANNNGNGKS LESWIWDAAC SIRGAKDAPK YKEFILPLIF TKRLCDVFDD ELNRIAAEVG SRKKAFQLVR ADHKLVRFYL PLVPFDPEEP VWSVIRKFSD RIGEGVTTHM RAIARENPLL QGIIDRVDFN ATTHGQRDID DDRLSNLIEA ISTKCLGLDD VEADIIGKSY EYLIRKFAEG GGQSAGEFYT PPEVGTIMSR VLAPEPGMDI YDPCCGSGGL LVKCEIAMEE KRREIKEGGH SCPPLHSELN GYPSCNGGLE NPPSIAPLKL YGQEYIADTW AMANMNMIIH DMEGQIEIGD TFKNPKFRNK QGKLRTFDRV VANPMWNQDW FTEADYDNDE LDRFPAGAGF PGKSSADWGW IQHIHASLNN SGRAAIVLDT GAVSRGSGNA GTNKEKSVRK WFVDNDIIES VLYLPENLFY NTTAPGIVLF LNRDKEIERE GCVLLVNASR IFEKGDPKNF IPDEGIKRIV DTLIGWKEEE KLSRIVNLAE LKKNDYNISP SRYIHTGEAE TYRPIEDIVK DLNAIELEAR ETDEALRKIL KQLGVDV
|
| |