Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0305 |
Symbol | |
ID | 6373961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 300524 |
End bp | 302725 |
Gene Length | 2202 bp |
Protein Length | 733 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642682820 |
Product | photosystem P840 reaction center, large subunit |
Protein accession | YP_001958755 |
Protein GI | 189499285 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00464493 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGATC AAGCGAATCC AACAGGAGTC AAGCCAAAGG GGCAAGTGCC TCCTCCGAAG GGGAAGGTAC CTCCTCCGAA GGGGAATGGT GCACCTGCCG GGGGAGCATC CATCATTAAA GAAAAGGATG CCGCCAAAAT GAGGCGTTTT CTGTTCCAGC GAACAGAGAC CCGGTCAACC AAGTGGTATC AGGTTTTTGA TACCGACAAG GTAGACGATG AGCAGGTGGT CGGCGGCCAT CTGGCATTGC TGGGTGTGCT CGGTTTCATT ATGGGTATCT ACTACTTGTC GGGAATGCAG GTTCTGCCAT GGAATGGAGC ACCGGCTTTT CATGACAACT GGTTCTATCT GACAATCAAG CCTCGTATGG TATCGTTGGG TATCGACACG TACAGTCCAA GAACGGAAGA TCTGATAGCC GCATCATGGA AGCTCATGGG ATGGGCTATT CTGCATTTTG TTTCTGGCTC GATTCTCCTT TTCGGCGGCT GGCGTCACTG GACACACAAT CTGACCAATC CGTTCACAGG CCGTGCCGGT AATTTCCGTG AATTCAGATT TCTCGGAAAA TTCGGTGATG CTGTGTTTCA GGGCACAAGT GCTAAAACCT ACAAGGATGC TCTTGGACCC CATGCAGTGT ATATGTCACT TCTTTTCCTT GGCTGGGGTT TGATGTTGTG GATTGTGCTC GGATTTGCTC CGATTCCGGA TTTCCAGACA ATAAACTCTG AAGTGTTCAT GTCGTTTGTC TGGTTTCTCG TCTTTTTCGC TTTGGGGCTC TATTGGTGGA AAAATCCTCC GAATGCCGCG ATTCATCTGA ATGATGATAT GAAAGCGGCT TTCTCGGTGC ATCTTACCGC TATCGGCTAT GTCAATATCG CTCTTGGTAT TATTGCTTTT GTCGCTTTCC AGCAGGATTC ATTCGCGCCG TACTACGCCG AACTTGACAA ACTTGTCTTC TACATCTACG GTGAGCCTTT CAATCGTGTC AGCTTTGACT TTGTAGAGCA GGGTGGTAAA GTTCTGTCCG GTTCCAAGGA ATTTGCTGAG TTCCCCGCTT TCGCGATTCT CCCGAAAAAC GGTGAATCTT TCGGTATGGC ACGGGTAGTC ATCAACCTGA TTGTCTTCAA CCATATCATT TGTGGTGTTC TCTATGTTTT TGCAGGTGTC TACCATGGTG GCCAGTATCT GCTGAAAGTC CAGATAAACG GACTGTACAG TCAGATTAAA TCCATCTGGG TCGCCAAAGG CCGTGATCAG GAGCTGCAGG TAAAGATCCT CGGTACTATT ATGGCGCTCT GTTTCGCTAC CATGCTTTCT GTCTATGCGG TAATTGTCTG GAACACTATC TGCGAGCTGA ACTTTTTCGG CACCAATATC ATGATGTCGT TCTACTGGCT GAAACCGCTT CCATTCCTTC ACTGGATGTT TGAAGATCCG AGCATTAACG ACTGGGTAAT GGCTCATGTC ATCGTTGCCG GTTCACTCTT CTCTTTGATC GCTTTGGCCC GTATCGCTTT CTTCTCTCAC ACTTCACCGC TGTGGGATGA TCTCGGGCTC AAGAAAAACT CGTATTCGTT CCCATGCCTC GGGCCTGTTT ATGGTGGTAC CTGTGGTGTC TCTATCCAGG ATCAGCTCTG GTTCGCGATG TTGTGGGGTG TAAAGGGGCT GTCTGCTGTC TGCTGGTATA TTGACGGCGC ATGGATTGCT TCGATGATGT ATGGAGTTCC TGCTGCGGAC GCCAAAGCGT GGGATGCAGT TGCCGGGTTG TCGCATCACT ATTCAGCAGG TATTTTCTAT TACTTCTGGA CGGAAACCGT GACCATTTTC TCCAGCTCGC ATCTATCGGT TATTCTTATG ATCGGGCATC TTGTATGGTT TATCAGTTTT GCAGTCTGGT TTGAAGACAG GGGTTCCCGT CTTGAAGGTG CAGATGTACA GACCCGTACC ATCAGATGGC TGGGCAAGAA GTTCCTCAAT CGTGATGTGC AGTTCAGATT CCCTGTGCTG ACCATTTCAG ATTCGAAACT TGCCGGTACT TTCCTGTATT TCGGTGGTAC GTTTATGCTG GTGTTCCTGT TTATTGCCAA CGGTTTCTAT CAGACCAACA CGCCGGCACT TCCTCCGGTT GGTGACGCCG CAGTTTCAGG ACAGCAGTTG CTGACGCAGG TTGTTGACTT TATCATGAAA TTGATCGCCT GA
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Protein sequence | MADQANPTGV KPKGQVPPPK GKVPPPKGNG APAGGASIIK EKDAAKMRRF LFQRTETRST KWYQVFDTDK VDDEQVVGGH LALLGVLGFI MGIYYLSGMQ VLPWNGAPAF HDNWFYLTIK PRMVSLGIDT YSPRTEDLIA ASWKLMGWAI LHFVSGSILL FGGWRHWTHN LTNPFTGRAG NFREFRFLGK FGDAVFQGTS AKTYKDALGP HAVYMSLLFL GWGLMLWIVL GFAPIPDFQT INSEVFMSFV WFLVFFALGL YWWKNPPNAA IHLNDDMKAA FSVHLTAIGY VNIALGIIAF VAFQQDSFAP YYAELDKLVF YIYGEPFNRV SFDFVEQGGK VLSGSKEFAE FPAFAILPKN GESFGMARVV INLIVFNHII CGVLYVFAGV YHGGQYLLKV QINGLYSQIK SIWVAKGRDQ ELQVKILGTI MALCFATMLS VYAVIVWNTI CELNFFGTNI MMSFYWLKPL PFLHWMFEDP SINDWVMAHV IVAGSLFSLI ALARIAFFSH TSPLWDDLGL KKNSYSFPCL GPVYGGTCGV SIQDQLWFAM LWGVKGLSAV CWYIDGAWIA SMMYGVPAAD AKAWDAVAGL SHHYSAGIFY YFWTETVTIF SSSHLSVILM IGHLVWFISF AVWFEDRGSR LEGADVQTRT IRWLGKKFLN RDVQFRFPVL TISDSKLAGT FLYFGGTFML VFLFIANGFY QTNTPALPPV GDAAVSGQQL LTQVVDFIMK LIA
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