| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0304 |
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| Symbol | dapF |
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| ID | 6373960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 299323 |
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| End bp | 300093 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642682819 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001958754 |
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| Protein GI | 189499284 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.684099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00244199 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCAGGCG CGGGAAATGA TTTCATCGTA GTCGACAACA TGAAGAGAAC CATACGCCTG
AAAGAGTCAG AAATACGTGC TCTCTGCACG AGAAGAACCG GTATCGGGGC TGACGGGTTC
ATTCTTGTCG AACCCTCCGA AACATATGAT TTCAGCATGC GTTACTTCAA TGCTGACGGA
AAACCCGGCT CAATGTGCGG AAACGGCGGA AGATGCGCGG CATTTTTTTC AAGAACAGCG
GGAATCACCG GTGACACGTG CTCTTTCCAG GCGAATGGAA GCCGTTATGA TGCATGGGTT
ACCGGTGTTG AACGCGTGAA GCTGAAAATG ACCGAACCTG ATACATTCAG GGACGATATC
CATGCCAATG GTCTCAACTG TCATTTCGTC AATACAGGAT CGCCGCATAC CATCATTTAT
ACCGGAGAAC TTGAAACCTT CAACGTACAT GACACGGGTT ATGCTGTCCG CAATAACAAC
AGCCTCTTTC CGGAAGGGAC AAATGTCAAC TTCCTCCAGG TAACCGGGCC TGACAGCCTC
AGTGTACGAA CATTTGAGCG CGGTGTAGAA GCTGAAACGC TTGCCTGCGG AACCGGAGCG
GTTGCTGCTG CCTTAATGAG CTACAGACTT GGAAAAGTCT CTTCCACAAG CGTTTCCGTG
ACGGTAAAAA GCGGAGATGT TCTGAAGGTG GAATTTTCAG AAGACATGCG GGAGGTTTTT
CTTTCAGGAC CGGCAAAAGT CGTCTACACA GGAACGGTCA GTGTGACCTG A
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| Protein sequence | MSGAGNDFIV VDNMKRTIRL KESEIRALCT RRTGIGADGF ILVEPSETYD FSMRYFNADG
KPGSMCGNGG RCAAFFSRTA GITGDTCSFQ ANGSRYDAWV TGVERVKLKM TEPDTFRDDI
HANGLNCHFV NTGSPHTIIY TGELETFNVH DTGYAVRNNN SLFPEGTNVN FLQVTGPDSL
SVRTFERGVE AETLACGTGA VAAALMSYRL GKVSSTSVSV TVKSGDVLKV EFSEDMREVF
LSGPAKVVYT GTVSVT
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