Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0295 |
Symbol | |
ID | 6373950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 286427 |
End bp | 287746 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642682809 |
Product | threonine synthase |
Protein accession | YP_001958745 |
Protein GI | 189499275 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0498] Threonine synthase |
TIGRFAM ID | [TIGR00260] threonine synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.212464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTTTCT ACAGCACCAA TAAACAGTCC ACGCCCGCTT CGCTGAAAAA GGCCACGTTA GAGGGGCTGG CAAGTGACGG AGGCCTCTAT ATCCCCTCTG CGATTCCAAC CTTTTCAAAG GAGGAGATTG CGCTGCTCGA AGATGCTCCG TTCAACGATA TAGCATTTGC AATCGCAAAA AAATTCAACG GTGGAGAAAT TCCCGACGAC CATCTGTGGC AAATAATTGA AAGCTGCTTT ACGTTTAACA CTCCGCTTGT CGAACTTGAA AAGAACACCT ACGTCGAAGA ACTTTTTCAT GGGCCGACAC TTGCTTTCAA GGATTACGGC GCACGATTTC TCGCGCATCT CACCGGTTAT TTCGCCCAGG AAGACCATAC GCTCATAACC ATTCTCGTCG CGACATCCGG CGATACAGGC AGCGCTGTCG CTTATGGATT CAAAGGCGTC CCGAATACGC GCGTGGTACT ACTCTACCCT TCCGGCAAGG TCAGCAGGCT TCAGGAACAG CAACTCACGA CAGTCGGAGG CAACGTAACC GCACTGGAAA TATACGGAGA CTTCGACGAC TGCCAACGCC TCGTCAAACA GGCATTTATG GACGCGGAAC TCAAACAGCG GTTGTCCCTG ACATCGGCCA ACTCTATCAA TATTTCCCGT CTTATCCCGC AAACATTTTA CTACGCCTGG GGATCGTTGC AGCTCAAAGC CAGGCATCCG GGAAAAGAAG CTCTTTTTTC GGTCCCGAGC GGCAATTACG GCAACCTCAC TGCAGGCGTC CTTGCAAAAA AAATGGGGTT TCCCATCGCA CATTTCATCG CAGGCTCCAA TGCCAATGAC AGTGTGACGC GTTATCTCGA GGAGGGACGA TATGAGCCTC ACCCCACAAT TGGAACCCTG TCATCGGCAA TGGATGTGGG CAACCCGAGC AATTTTGCCC GGTTGAGACA TATTTACGGG GATGACTACC GGGCAATGGC AGCTGACATT TCCGGACACG CCATCTCCGA CACCGAAACC CTTGACACAA TCAGAACAGT CTACGACCGG TTCGGCTATA TCATGGACCC GCACACCGCC GTCGGGTTCC GGGCACTTGA AAAGTTCAGA CAAGCCAACG GCGCGTCAAC CGAACCCGCC GCCATCATGT CAACCGCACA CCCGGCGAAG TTCATCGAAG CCATCAAGGA AGCTCTCGAC AGGGATATCA CTATTCCCGA CCGCCTTCAG GCAGTTCTCG ACAGAAAAAA AATAGCCATC CCGATCAGTG CCGACTACAG AGAACTCACA GAGTTCCTGA CCGGACTTGA TGACAGGTAA
|
Protein sequence | MIFYSTNKQS TPASLKKATL EGLASDGGLY IPSAIPTFSK EEIALLEDAP FNDIAFAIAK KFNGGEIPDD HLWQIIESCF TFNTPLVELE KNTYVEELFH GPTLAFKDYG ARFLAHLTGY FAQEDHTLIT ILVATSGDTG SAVAYGFKGV PNTRVVLLYP SGKVSRLQEQ QLTTVGGNVT ALEIYGDFDD CQRLVKQAFM DAELKQRLSL TSANSINISR LIPQTFYYAW GSLQLKARHP GKEALFSVPS GNYGNLTAGV LAKKMGFPIA HFIAGSNAND SVTRYLEEGR YEPHPTIGTL SSAMDVGNPS NFARLRHIYG DDYRAMAADI SGHAISDTET LDTIRTVYDR FGYIMDPHTA VGFRALEKFR QANGASTEPA AIMSTAHPAK FIEAIKEALD RDITIPDRLQ AVLDRKKIAI PISADYRELT EFLTGLDDR
|
| |