Gene Cphamn1_0295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0295 
Symbol 
ID6373950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp286427 
End bp287746 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content52% 
IMG OID642682809 
Productthreonine synthase 
Protein accessionYP_001958745 
Protein GI189499275 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.212464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTCT ACAGCACCAA TAAACAGTCC ACGCCCGCTT CGCTGAAAAA GGCCACGTTA 
GAGGGGCTGG CAAGTGACGG AGGCCTCTAT ATCCCCTCTG CGATTCCAAC CTTTTCAAAG
GAGGAGATTG CGCTGCTCGA AGATGCTCCG TTCAACGATA TAGCATTTGC AATCGCAAAA
AAATTCAACG GTGGAGAAAT TCCCGACGAC CATCTGTGGC AAATAATTGA AAGCTGCTTT
ACGTTTAACA CTCCGCTTGT CGAACTTGAA AAGAACACCT ACGTCGAAGA ACTTTTTCAT
GGGCCGACAC TTGCTTTCAA GGATTACGGC GCACGATTTC TCGCGCATCT CACCGGTTAT
TTCGCCCAGG AAGACCATAC GCTCATAACC ATTCTCGTCG CGACATCCGG CGATACAGGC
AGCGCTGTCG CTTATGGATT CAAAGGCGTC CCGAATACGC GCGTGGTACT ACTCTACCCT
TCCGGCAAGG TCAGCAGGCT TCAGGAACAG CAACTCACGA CAGTCGGAGG CAACGTAACC
GCACTGGAAA TATACGGAGA CTTCGACGAC TGCCAACGCC TCGTCAAACA GGCATTTATG
GACGCGGAAC TCAAACAGCG GTTGTCCCTG ACATCGGCCA ACTCTATCAA TATTTCCCGT
CTTATCCCGC AAACATTTTA CTACGCCTGG GGATCGTTGC AGCTCAAAGC CAGGCATCCG
GGAAAAGAAG CTCTTTTTTC GGTCCCGAGC GGCAATTACG GCAACCTCAC TGCAGGCGTC
CTTGCAAAAA AAATGGGGTT TCCCATCGCA CATTTCATCG CAGGCTCCAA TGCCAATGAC
AGTGTGACGC GTTATCTCGA GGAGGGACGA TATGAGCCTC ACCCCACAAT TGGAACCCTG
TCATCGGCAA TGGATGTGGG CAACCCGAGC AATTTTGCCC GGTTGAGACA TATTTACGGG
GATGACTACC GGGCAATGGC AGCTGACATT TCCGGACACG CCATCTCCGA CACCGAAACC
CTTGACACAA TCAGAACAGT CTACGACCGG TTCGGCTATA TCATGGACCC GCACACCGCC
GTCGGGTTCC GGGCACTTGA AAAGTTCAGA CAAGCCAACG GCGCGTCAAC CGAACCCGCC
GCCATCATGT CAACCGCACA CCCGGCGAAG TTCATCGAAG CCATCAAGGA AGCTCTCGAC
AGGGATATCA CTATTCCCGA CCGCCTTCAG GCAGTTCTCG ACAGAAAAAA AATAGCCATC
CCGATCAGTG CCGACTACAG AGAACTCACA GAGTTCCTGA CCGGACTTGA TGACAGGTAA
 
Protein sequence
MIFYSTNKQS TPASLKKATL EGLASDGGLY IPSAIPTFSK EEIALLEDAP FNDIAFAIAK 
KFNGGEIPDD HLWQIIESCF TFNTPLVELE KNTYVEELFH GPTLAFKDYG ARFLAHLTGY
FAQEDHTLIT ILVATSGDTG SAVAYGFKGV PNTRVVLLYP SGKVSRLQEQ QLTTVGGNVT
ALEIYGDFDD CQRLVKQAFM DAELKQRLSL TSANSINISR LIPQTFYYAW GSLQLKARHP
GKEALFSVPS GNYGNLTAGV LAKKMGFPIA HFIAGSNAND SVTRYLEEGR YEPHPTIGTL
SSAMDVGNPS NFARLRHIYG DDYRAMAADI SGHAISDTET LDTIRTVYDR FGYIMDPHTA
VGFRALEKFR QANGASTEPA AIMSTAHPAK FIEAIKEALD RDITIPDRLQ AVLDRKKIAI
PISADYRELT EFLTGLDDR