| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0287 |
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| Symbol | hemE |
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| ID | 6373942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 279609 |
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| End bp | 280664 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642682801 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001958737 |
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| Protein GI | 189499267 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.551213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAA ATGACCTTTT TCTTCGGGCG TTAAAACGGC AGCCGGTTCC AAGAACGCCA
ATCTGGGTGA TGCGTCAGGC AGGGCGTTAT TTGCCGGAGT ACCGTGCAAT AAGAGAAAAA
ACAGATTTTC TTACCTTGTG CAAAACCCCG GAACTTGCAA CAGAAGTTAC CATTCAGCCC
GTCGATATCA TTGGCGTAGA CGCAGCCATT ATTTTCTCGG ATATTCTTGT TGTCAACGAA
GCCATGGGGA TGAATGTCGA GATCATTGAA TCAAAGGGTA TCCGGCTTTC ACCTCCTATC
CGCTCCCAGG TTGACATCGA TCGTCTGATC ATTCCCGATA TCAACGAAAA GCTCGGCTAT
GTCATGGACG CTCTTCGAAT GACAAAGAAA GAGCTTGACG GCAGGGTTCC GCTGATCGGT
TTTTCCGGTG CGGCATGGAC GCTCTTTACC TATGCGGTAG AAGGCGGGGG TTCAAAGAAC
TATGCGTTTG CCAAGAAGAT GATGTATCGT GAGCCTAAAA TGGCGCATAT GCTGCTCAGC
AAGATTTCAC GGGTCATCAC CGAGTATCTC CTGATGCAGA TCGAAGCAGG AGCCGATGCC
GTGCAGATTT TTGATTCCTG GGCAAGTGCT CTTTCCGAGG ATGATTATCG CGAATTCGCT
CTTCCCTATA TCAAGGAAAG CGTTCAGGCG GTCAAGACCA AGTATCCCGA TACACCGGTA
ATCGTGTTCT CCAAGGACTG CAACACCATT CTTTCTGATA TCGCCGATAC CGGTTGTGAT
GCCATGGGGC TTGGCTGGAA CATGGATATT TCAAAAGCCC GTGCGGAGCT GAAAGATCGT
GTCACGATCC AGGGTAACAT GGATCCTACC GTGCTGTATG GTACTCATGA TAAAATCCGC
GCTGAAGCCG GGAAAATTCT CGAACGATTC GGGCAGCACT CCGAGTGTTC AGGTCATGTT
TTCAATCTCG GTCACGGTAT ACTTCCCGAT GTCGATCCGG AAAACCTGAA ATGCCTGGTT
GATTTCGTCA AGGAAGAGAG CACAAAGTAT CACTGA
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| Protein sequence | MLKNDLFLRA LKRQPVPRTP IWVMRQAGRY LPEYRAIREK TDFLTLCKTP ELATEVTIQP
VDIIGVDAAI IFSDILVVNE AMGMNVEIIE SKGIRLSPPI RSQVDIDRLI IPDINEKLGY
VMDALRMTKK ELDGRVPLIG FSGAAWTLFT YAVEGGGSKN YAFAKKMMYR EPKMAHMLLS
KISRVITEYL LMQIEAGADA VQIFDSWASA LSEDDYREFA LPYIKESVQA VKTKYPDTPV
IVFSKDCNTI LSDIADTGCD AMGLGWNMDI SKARAELKDR VTIQGNMDPT VLYGTHDKIR
AEAGKILERF GQHSECSGHV FNLGHGILPD VDPENLKCLV DFVKEESTKY H
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