Gene Cphamn1_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0280 
Symbol 
ID6373935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp270469 
End bp273681 
Gene Length3213 bp 
Protein Length1070 aa 
Translation table11 
GC content51% 
IMG OID642682794 
Productacriflavin resistance protein 
Protein accessionYP_001958730 
Protein GI189499260 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.186381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGAAG GAATAGCAGG AAAGCTTGCG AAGATGTTTA TCAATTCCAG GCTTACTCCT 
TTATTGATGA TTACCGCGCT TCTTGTGGGT GTGCTGGCAA CGTCCATGAC ACCTCGGGAA
GAGGAGCCGC AGATTTCCGT TCCGCTGGTT GACCTCTACT TCAGTTACCC CGGAGGGAGT
GCCAAAGAGG TTGAAGAGAG GGTCGCAAAG CCTGTTGAAA AGTACCTGAC CGAGATAGAT
GGAGTCGATT ATGTCTACTC TACCTCACAG AAGGATTTTG CGCTGGTGAC TGTCCGTTAT
GAGGTTGGTG ACGATACTGA GGATAGTATG GTCAAGCTCT GGGCGACCAT TATGAAGAAT
ATGGACAGGA TGCCTGCCGG GATGCAGTTT CCTCTTGTCA AAAAGGTGTC GATCGACGAT
GTGTCTGTAC TCAATCTTAC ATTCTGGAGT GAGAGTTACG GTCCCTATCA GTTGAGGAAA
GTTGCCTCCC AGGTTGCCGA CGAGCTCAAG AAAATCAAGA ATATCGGTGA TGTTAACCTG
AACGGGGGGC TGAAACGACA GTTGAGAATT GTTCTCGACA AGGAAAAGCT TGCCCGGTAC
AGGATCACGC CATTGCAGAT CTCGCGGCAG ATCCGGGCAT CCAACAGCAG GGTAACCGCA
GGAACCTTCA AACAGATGAA CCGTGAGTTC ACGGTCAATA CAGGAGAGTT TCTCAAAACT
GCCGAGGATG TGCGAAACGT CGTTGTCGGA ATATATAATT CAGATCCGGT GTACCTGAAC
GATGTCGCGG AAGTTATCGA CGGACCGGAA GAGGTTGAGA ATTATACATT CTTCGGCTAC
GGCGCTGCAG TCGGAGAGGC GTCTCCAGGC GGAGAATATC CGGCTGTGAC ACTCACCGTC
GCGAAACGAA AGGGGAGCGA TGCAACGGTG CTTGCCGAAA AAGTTCTGGA AAAGGTCGAA
GCATTGAACG GTTCCGTCAT TACCAAGGGA ATTACCGTGA CGGAGACCAG GAATTACGGG
GAAACCGCTT CTGAAAAGGT ATTTACGCTG CTTGAACATC TGCTGGGTGC CGTTGTCGCG
GTAACCATCG TCGTCAGTTT GTTTCTCGGC TGGCGCGGCG GGCTTGTCGT GTTCGCCTCT
GTGCCGATAA CCTTCGCGCT GACCCTGCTG GTCTACTATC TCTTCGATTA TACACTGAAC
AGGGTGACGC TTTTCGCACT GATATTCGTG ACCGGTATCG TGGTCGATGA TTCGATTATC
ATCGCTGAAA ATATTCACCG GCATTTTTCA ATGCGCAGGA TGCCGAAAAT GCAGGCGGCT
ATTGCAGCTA TCAATGAGGT CGGTAACCCG ACAATTCTTG CCACCTTTAC GGTCATTGCC
TCCGTTCTTC CGATGGTGTT CGTGTCCGGT CTGATGGGGC CCTATATGAG TCCGATGCCC
ATCGGGGCGT CGCTCGCCAT GATTTTTTCT CTCTTTGTGG CGCTTATCGT TACGCCCTGG
CTGGCATTTC GGTTGCTGAA AGCGGAAAAA ACGCATGCAG AGGAGTATGA TATCCGAAAC
TCGCTCTATT ACAAGGTGTA TGAAAAAACG CTTGTTCCCC TGCTCGATAG CTGGTGGAAG
CGTGCGATCG CTTTTGCGTT TGTCGGCCTG TTGCTCCTCG GATCCATTGC AATGATTCCG
CTGAAGATGG TGGAGCTGAA AATGCTGCCA TTTGATAACA AGAGTGAGTT TCAGGTTGTT
GTCGATATGC CCGAGGGGAC AACGCTCGAA CAGACCGCAC GGGCGACAAA GGATATTGTA
TCCTATCTGA AAACCGTCAA GGAGGTTGAA AATTACCAGT ACTATGTCGG AACCAACGCT
CCGATCAATT TCAACGGGCT GGTGCGCCAT TACTATCTCC GGCAGAGTGC TGATATGGCT
GATATCCAGG TGAATCTGGT GCACAAGAGC GAGCGTAGCG ACCAGAGCCA CGCCATCGCA
AAGCGGGTCA GACCGACGGT TCAGGAGATT GCGGCAAAGT ATAACGCGAA TGTCAAGGTT
GTAGAGGTTC CTCCGGGCCC TCCTGTACTC TCAACCATCG TGGCGGAAAT CTACGGTCCT
GATCAGGATC AGCAGATCGA CCTTGCGCGG AAAATAAAAG CCGTGATGGA GGATACTCCC
GGCGTGGTTG ATGTTGACTG GATGGTAGAA GATGACGAGA AGGTATACAA TCTGCTGATC
GACAAGGAAA AAGCCGCATT CAGGGGAATC ACCACTGAGC AGATCACCAG CACGCTTCGT
ATGGCGCTTG ATGGTTCTGA AACCGGTTTG CTGCATACCG ATACCGAGCT TGAGCCTGTC
GTTCTTGAAT TGCGCCTTCC GCTCTCCGCA AGGGCATCGA TTCGCGATCT GTCTGATATT
TATGTGAAGT CTCAGGGTAT GCAGTCGTTG ACGACAAGGC TTCCTGCAGG AGAGATGATT
TCCTTGTCTG AACTGGTTAC CGTCCGTGAG AAGATCGAGG ACAAGAGCAT CTATAGAAAA
GACCTGAAAA ATGTCGTGTA TGTGACGGCC GATGTGGCGG GTGTCGCTGA AAGCCCTGTC
TACGCGATGC TCGATATGGA CAAGCGTATC AAGGAACTTG AAATGCCTGG CGGTTACGGA
ATCTCCCCGC TCTATACCGC TCCTCCTTTC AATGAAGACA AGCTTGCAAT GAAGTGGGAC
GGTGAGTGGC AGATTACCTT CGAGGTGTTC AGGGATCTCG GAACCGCGTT TGCAGTCGTA
CTGGTGATCA TTTATCTTCT GATTGTAGGG TGGTTCCAGT CTTTCAGGAC TCCGCTGGTG
ATGATGGTAG CGATTCCTCT CAGCCTGGTC GGCATCATTC CGGGTCATTT CGTTCACGGG
GCATTCTTTA CCGCTACCAG TATGATCGGT ATGATCGCGC TTGCCGGCAT TATGGTAAGA
AACTCCGTGC TGATTATCGA TTTTATCCAG TTGCGTGTAC AGGAAGGCAT AGAGCTGAAA
CAGGCGGTTG TGGAATCGGC GGCTGTTCGT ACCAGACCGA TTCTGCTGAC GGCAGGTACG
GTGGTCATCG GGGCGATTGT GATCCTGTTC GACCCGATTT TCCAGGGGCT GGCAATCTCT
CTGATGTGGG GTGCGGTGCT TTCTACAATC CTGACGCTTG GCGTGGTACC GCTTACCTAT
TACCTTGTTG AGAAAGGCAA AAAGAGTGCA TGA
 
Protein sequence
MREGIAGKLA KMFINSRLTP LLMITALLVG VLATSMTPRE EEPQISVPLV DLYFSYPGGS 
AKEVEERVAK PVEKYLTEID GVDYVYSTSQ KDFALVTVRY EVGDDTEDSM VKLWATIMKN
MDRMPAGMQF PLVKKVSIDD VSVLNLTFWS ESYGPYQLRK VASQVADELK KIKNIGDVNL
NGGLKRQLRI VLDKEKLARY RITPLQISRQ IRASNSRVTA GTFKQMNREF TVNTGEFLKT
AEDVRNVVVG IYNSDPVYLN DVAEVIDGPE EVENYTFFGY GAAVGEASPG GEYPAVTLTV
AKRKGSDATV LAEKVLEKVE ALNGSVITKG ITVTETRNYG ETASEKVFTL LEHLLGAVVA
VTIVVSLFLG WRGGLVVFAS VPITFALTLL VYYLFDYTLN RVTLFALIFV TGIVVDDSII
IAENIHRHFS MRRMPKMQAA IAAINEVGNP TILATFTVIA SVLPMVFVSG LMGPYMSPMP
IGASLAMIFS LFVALIVTPW LAFRLLKAEK THAEEYDIRN SLYYKVYEKT LVPLLDSWWK
RAIAFAFVGL LLLGSIAMIP LKMVELKMLP FDNKSEFQVV VDMPEGTTLE QTARATKDIV
SYLKTVKEVE NYQYYVGTNA PINFNGLVRH YYLRQSADMA DIQVNLVHKS ERSDQSHAIA
KRVRPTVQEI AAKYNANVKV VEVPPGPPVL STIVAEIYGP DQDQQIDLAR KIKAVMEDTP
GVVDVDWMVE DDEKVYNLLI DKEKAAFRGI TTEQITSTLR MALDGSETGL LHTDTELEPV
VLELRLPLSA RASIRDLSDI YVKSQGMQSL TTRLPAGEMI SLSELVTVRE KIEDKSIYRK
DLKNVVYVTA DVAGVAESPV YAMLDMDKRI KELEMPGGYG ISPLYTAPPF NEDKLAMKWD
GEWQITFEVF RDLGTAFAVV LVIIYLLIVG WFQSFRTPLV MMVAIPLSLV GIIPGHFVHG
AFFTATSMIG MIALAGIMVR NSVLIIDFIQ LRVQEGIELK QAVVESAAVR TRPILLTAGT
VVIGAIVILF DPIFQGLAIS LMWGAVLSTI LTLGVVPLTY YLVEKGKKSA