Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0280 |
Symbol | |
ID | 6373935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 270469 |
End bp | 273681 |
Gene Length | 3213 bp |
Protein Length | 1070 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642682794 |
Product | acriflavin resistance protein |
Protein accession | YP_001958730 |
Protein GI | 189499260 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.186381 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGAAG GAATAGCAGG AAAGCTTGCG AAGATGTTTA TCAATTCCAG GCTTACTCCT TTATTGATGA TTACCGCGCT TCTTGTGGGT GTGCTGGCAA CGTCCATGAC ACCTCGGGAA GAGGAGCCGC AGATTTCCGT TCCGCTGGTT GACCTCTACT TCAGTTACCC CGGAGGGAGT GCCAAAGAGG TTGAAGAGAG GGTCGCAAAG CCTGTTGAAA AGTACCTGAC CGAGATAGAT GGAGTCGATT ATGTCTACTC TACCTCACAG AAGGATTTTG CGCTGGTGAC TGTCCGTTAT GAGGTTGGTG ACGATACTGA GGATAGTATG GTCAAGCTCT GGGCGACCAT TATGAAGAAT ATGGACAGGA TGCCTGCCGG GATGCAGTTT CCTCTTGTCA AAAAGGTGTC GATCGACGAT GTGTCTGTAC TCAATCTTAC ATTCTGGAGT GAGAGTTACG GTCCCTATCA GTTGAGGAAA GTTGCCTCCC AGGTTGCCGA CGAGCTCAAG AAAATCAAGA ATATCGGTGA TGTTAACCTG AACGGGGGGC TGAAACGACA GTTGAGAATT GTTCTCGACA AGGAAAAGCT TGCCCGGTAC AGGATCACGC CATTGCAGAT CTCGCGGCAG ATCCGGGCAT CCAACAGCAG GGTAACCGCA GGAACCTTCA AACAGATGAA CCGTGAGTTC ACGGTCAATA CAGGAGAGTT TCTCAAAACT GCCGAGGATG TGCGAAACGT CGTTGTCGGA ATATATAATT CAGATCCGGT GTACCTGAAC GATGTCGCGG AAGTTATCGA CGGACCGGAA GAGGTTGAGA ATTATACATT CTTCGGCTAC GGCGCTGCAG TCGGAGAGGC GTCTCCAGGC GGAGAATATC CGGCTGTGAC ACTCACCGTC GCGAAACGAA AGGGGAGCGA TGCAACGGTG CTTGCCGAAA AAGTTCTGGA AAAGGTCGAA GCATTGAACG GTTCCGTCAT TACCAAGGGA ATTACCGTGA CGGAGACCAG GAATTACGGG GAAACCGCTT CTGAAAAGGT ATTTACGCTG CTTGAACATC TGCTGGGTGC CGTTGTCGCG GTAACCATCG TCGTCAGTTT GTTTCTCGGC TGGCGCGGCG GGCTTGTCGT GTTCGCCTCT GTGCCGATAA CCTTCGCGCT GACCCTGCTG GTCTACTATC TCTTCGATTA TACACTGAAC AGGGTGACGC TTTTCGCACT GATATTCGTG ACCGGTATCG TGGTCGATGA TTCGATTATC ATCGCTGAAA ATATTCACCG GCATTTTTCA ATGCGCAGGA TGCCGAAAAT GCAGGCGGCT ATTGCAGCTA TCAATGAGGT CGGTAACCCG ACAATTCTTG CCACCTTTAC GGTCATTGCC TCCGTTCTTC CGATGGTGTT CGTGTCCGGT CTGATGGGGC CCTATATGAG TCCGATGCCC ATCGGGGCGT CGCTCGCCAT GATTTTTTCT CTCTTTGTGG CGCTTATCGT TACGCCCTGG CTGGCATTTC GGTTGCTGAA AGCGGAAAAA ACGCATGCAG AGGAGTATGA TATCCGAAAC TCGCTCTATT ACAAGGTGTA TGAAAAAACG CTTGTTCCCC TGCTCGATAG CTGGTGGAAG CGTGCGATCG CTTTTGCGTT TGTCGGCCTG TTGCTCCTCG GATCCATTGC AATGATTCCG CTGAAGATGG TGGAGCTGAA AATGCTGCCA TTTGATAACA AGAGTGAGTT TCAGGTTGTT GTCGATATGC CCGAGGGGAC AACGCTCGAA CAGACCGCAC GGGCGACAAA GGATATTGTA TCCTATCTGA AAACCGTCAA GGAGGTTGAA AATTACCAGT ACTATGTCGG AACCAACGCT CCGATCAATT TCAACGGGCT GGTGCGCCAT TACTATCTCC GGCAGAGTGC TGATATGGCT GATATCCAGG TGAATCTGGT GCACAAGAGC GAGCGTAGCG ACCAGAGCCA CGCCATCGCA AAGCGGGTCA GACCGACGGT TCAGGAGATT GCGGCAAAGT ATAACGCGAA TGTCAAGGTT GTAGAGGTTC CTCCGGGCCC TCCTGTACTC TCAACCATCG TGGCGGAAAT CTACGGTCCT GATCAGGATC AGCAGATCGA CCTTGCGCGG AAAATAAAAG CCGTGATGGA GGATACTCCC GGCGTGGTTG ATGTTGACTG GATGGTAGAA GATGACGAGA AGGTATACAA TCTGCTGATC GACAAGGAAA AAGCCGCATT CAGGGGAATC ACCACTGAGC AGATCACCAG CACGCTTCGT ATGGCGCTTG ATGGTTCTGA AACCGGTTTG CTGCATACCG ATACCGAGCT TGAGCCTGTC GTTCTTGAAT TGCGCCTTCC GCTCTCCGCA AGGGCATCGA TTCGCGATCT GTCTGATATT TATGTGAAGT CTCAGGGTAT GCAGTCGTTG ACGACAAGGC TTCCTGCAGG AGAGATGATT TCCTTGTCTG AACTGGTTAC CGTCCGTGAG AAGATCGAGG ACAAGAGCAT CTATAGAAAA GACCTGAAAA ATGTCGTGTA TGTGACGGCC GATGTGGCGG GTGTCGCTGA AAGCCCTGTC TACGCGATGC TCGATATGGA CAAGCGTATC AAGGAACTTG AAATGCCTGG CGGTTACGGA ATCTCCCCGC TCTATACCGC TCCTCCTTTC AATGAAGACA AGCTTGCAAT GAAGTGGGAC GGTGAGTGGC AGATTACCTT CGAGGTGTTC AGGGATCTCG GAACCGCGTT TGCAGTCGTA CTGGTGATCA TTTATCTTCT GATTGTAGGG TGGTTCCAGT CTTTCAGGAC TCCGCTGGTG ATGATGGTAG CGATTCCTCT CAGCCTGGTC GGCATCATTC CGGGTCATTT CGTTCACGGG GCATTCTTTA CCGCTACCAG TATGATCGGT ATGATCGCGC TTGCCGGCAT TATGGTAAGA AACTCCGTGC TGATTATCGA TTTTATCCAG TTGCGTGTAC AGGAAGGCAT AGAGCTGAAA CAGGCGGTTG TGGAATCGGC GGCTGTTCGT ACCAGACCGA TTCTGCTGAC GGCAGGTACG GTGGTCATCG GGGCGATTGT GATCCTGTTC GACCCGATTT TCCAGGGGCT GGCAATCTCT CTGATGTGGG GTGCGGTGCT TTCTACAATC CTGACGCTTG GCGTGGTACC GCTTACCTAT TACCTTGTTG AGAAAGGCAA AAAGAGTGCA TGA
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Protein sequence | MREGIAGKLA KMFINSRLTP LLMITALLVG VLATSMTPRE EEPQISVPLV DLYFSYPGGS AKEVEERVAK PVEKYLTEID GVDYVYSTSQ KDFALVTVRY EVGDDTEDSM VKLWATIMKN MDRMPAGMQF PLVKKVSIDD VSVLNLTFWS ESYGPYQLRK VASQVADELK KIKNIGDVNL NGGLKRQLRI VLDKEKLARY RITPLQISRQ IRASNSRVTA GTFKQMNREF TVNTGEFLKT AEDVRNVVVG IYNSDPVYLN DVAEVIDGPE EVENYTFFGY GAAVGEASPG GEYPAVTLTV AKRKGSDATV LAEKVLEKVE ALNGSVITKG ITVTETRNYG ETASEKVFTL LEHLLGAVVA VTIVVSLFLG WRGGLVVFAS VPITFALTLL VYYLFDYTLN RVTLFALIFV TGIVVDDSII IAENIHRHFS MRRMPKMQAA IAAINEVGNP TILATFTVIA SVLPMVFVSG LMGPYMSPMP IGASLAMIFS LFVALIVTPW LAFRLLKAEK THAEEYDIRN SLYYKVYEKT LVPLLDSWWK RAIAFAFVGL LLLGSIAMIP LKMVELKMLP FDNKSEFQVV VDMPEGTTLE QTARATKDIV SYLKTVKEVE NYQYYVGTNA PINFNGLVRH YYLRQSADMA DIQVNLVHKS ERSDQSHAIA KRVRPTVQEI AAKYNANVKV VEVPPGPPVL STIVAEIYGP DQDQQIDLAR KIKAVMEDTP GVVDVDWMVE DDEKVYNLLI DKEKAAFRGI TTEQITSTLR MALDGSETGL LHTDTELEPV VLELRLPLSA RASIRDLSDI YVKSQGMQSL TTRLPAGEMI SLSELVTVRE KIEDKSIYRK DLKNVVYVTA DVAGVAESPV YAMLDMDKRI KELEMPGGYG ISPLYTAPPF NEDKLAMKWD GEWQITFEVF RDLGTAFAVV LVIIYLLIVG WFQSFRTPLV MMVAIPLSLV GIIPGHFVHG AFFTATSMIG MIALAGIMVR NSVLIIDFIQ LRVQEGIELK QAVVESAAVR TRPILLTAGT VVIGAIVILF DPIFQGLAIS LMWGAVLSTI LTLGVVPLTY YLVEKGKKSA
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