Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0261 |
Symbol | |
ID | 6373916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 253671 |
End bp | 255077 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642682775 |
Product | Na+/solute symporter |
Protein accession | YP_001958711 |
Protein GI | 189499241 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.728087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACGC TCGATCTCAT CATCATCATA GGCTTCCTTG CCGCAATGGC CGGATACGGG ATCTGGCAGG GACACACCAA CCGGACTACC GGTGATTACT TCCTCGGGGG GCGCAACCTC CCCTGGATCG TCGCCATGTT TTCCATTGTT GCCACTGAAA CTTCGGTACT GACTTTCGTC AGCATCCCAG GTATAGCGTT CAGGGGTGAC TGGACTTTTC TGCAGCTCGC TATGGGTTAT ATCATCGGCA GAATGCTGGT CAGCGCTGTG CTGCTTCCGA TCTACTTCCG TCAAGGAGTC AGCTCGATTT ATGAAGTAAT CGGAAACCGT TTCGGCCCTC ACATGCAAAA ACTTGCCTCA ACTGTTTTTC TGGTCACCAG AATTTTAGCT GACGGGGTAA GGTTCCTTGC TACTGCTGTG GTCGTTGAAG CGGTAACCGG ATGGTCCCTC TCAGCCTCGG TACTCATTAT CGGTATCGTC ACACTGGTTT ATACGCTGTC GGGAGGAATA CGAACAATCG TCTGGATCGA CAGCATCCAG TTCGTCCTAT ATTTTGTCGG CGGAATTATC ACCATTGCGT TTATCGCCGC AAACCTCGAT GTCGGACTAC CCGAAGCGTT GGGAGCCCTT GCCAACGAAG GCAAGCTGAA AGTGATCAAT CATGACTGGC GCCTCTTTTC AGAGCCCTGG GCTTTCTTCA GCGCACTTAC AGGAGGTATA CTCCTTTCAT TCGCGTCACA TGGAGTTGAC TATATGATGG TACAGCGCGT GCTCGGCTGC AAAAACCTCA GCGCGGCAAG AAAAGCGATG ATCGGAAGCG GATTTTTTGT ATTCATTCAG TTCACTGTAT TCCTGCTTGC CGGCTCGCTG ATCTATCTTT TTATCGGAGA TGTTCAGATT GAAAAAGACC GTGAGTTCGC CTCTTTCATT GTCAACCACC TGCCTGTCGG CCTGAAAGGC CTCCTGCTCG CAGGCGTGCT TTCGGCCGCA ATGTCAACAC TCAGCTCTTC AATTAACTCA CTCGCTTCAT CGACGGTAAC CGATCTGCTG GGGGGCAACG CTTCACTGAA ACGCTCCAGG TTGATAAGCC TCGGATGGGC AGCCGTACTC ATCAGCATAG CACTGGTATT TGATGAAAGC GACAACGCAA TTGTCGTGCT GGGCCTTAAA ATCGCATCTT TTACCTACGG AGGACTGCTC GGCCTTTTCC TCCTTTCCGT TAGCGGCAAA GAGTTTCATG TTTTCAGCCT CTCGATGGGG CTGATAGCCG GGATGGGCAC AGTATTCGTG CTGGATTATC TGACCTTTGC ATGGACCTGG TACATAGCCG CCTCAGTCCT TGCCAACCTG CTTGTAGTCT GGATTACCGA GACTGTTTTG AATAACAGTT TCATAAGACG ATCGTAA
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Protein sequence | MQTLDLIIII GFLAAMAGYG IWQGHTNRTT GDYFLGGRNL PWIVAMFSIV ATETSVLTFV SIPGIAFRGD WTFLQLAMGY IIGRMLVSAV LLPIYFRQGV SSIYEVIGNR FGPHMQKLAS TVFLVTRILA DGVRFLATAV VVEAVTGWSL SASVLIIGIV TLVYTLSGGI RTIVWIDSIQ FVLYFVGGII TIAFIAANLD VGLPEALGAL ANEGKLKVIN HDWRLFSEPW AFFSALTGGI LLSFASHGVD YMMVQRVLGC KNLSAARKAM IGSGFFVFIQ FTVFLLAGSL IYLFIGDVQI EKDREFASFI VNHLPVGLKG LLLAGVLSAA MSTLSSSINS LASSTVTDLL GGNASLKRSR LISLGWAAVL ISIALVFDES DNAIVVLGLK IASFTYGGLL GLFLLSVSGK EFHVFSLSMG LIAGMGTVFV LDYLTFAWTW YIAASVLANL LVVWITETVL NNSFIRRS
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