Gene Cphamn1_0261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0261 
Symbol 
ID6373916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp253671 
End bp255077 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content51% 
IMG OID642682775 
ProductNa+/solute symporter 
Protein accessionYP_001958711 
Protein GI189499241 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.728087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACGC TCGATCTCAT CATCATCATA GGCTTCCTTG CCGCAATGGC CGGATACGGG 
ATCTGGCAGG GACACACCAA CCGGACTACC GGTGATTACT TCCTCGGGGG GCGCAACCTC
CCCTGGATCG TCGCCATGTT TTCCATTGTT GCCACTGAAA CTTCGGTACT GACTTTCGTC
AGCATCCCAG GTATAGCGTT CAGGGGTGAC TGGACTTTTC TGCAGCTCGC TATGGGTTAT
ATCATCGGCA GAATGCTGGT CAGCGCTGTG CTGCTTCCGA TCTACTTCCG TCAAGGAGTC
AGCTCGATTT ATGAAGTAAT CGGAAACCGT TTCGGCCCTC ACATGCAAAA ACTTGCCTCA
ACTGTTTTTC TGGTCACCAG AATTTTAGCT GACGGGGTAA GGTTCCTTGC TACTGCTGTG
GTCGTTGAAG CGGTAACCGG ATGGTCCCTC TCAGCCTCGG TACTCATTAT CGGTATCGTC
ACACTGGTTT ATACGCTGTC GGGAGGAATA CGAACAATCG TCTGGATCGA CAGCATCCAG
TTCGTCCTAT ATTTTGTCGG CGGAATTATC ACCATTGCGT TTATCGCCGC AAACCTCGAT
GTCGGACTAC CCGAAGCGTT GGGAGCCCTT GCCAACGAAG GCAAGCTGAA AGTGATCAAT
CATGACTGGC GCCTCTTTTC AGAGCCCTGG GCTTTCTTCA GCGCACTTAC AGGAGGTATA
CTCCTTTCAT TCGCGTCACA TGGAGTTGAC TATATGATGG TACAGCGCGT GCTCGGCTGC
AAAAACCTCA GCGCGGCAAG AAAAGCGATG ATCGGAAGCG GATTTTTTGT ATTCATTCAG
TTCACTGTAT TCCTGCTTGC CGGCTCGCTG ATCTATCTTT TTATCGGAGA TGTTCAGATT
GAAAAAGACC GTGAGTTCGC CTCTTTCATT GTCAACCACC TGCCTGTCGG CCTGAAAGGC
CTCCTGCTCG CAGGCGTGCT TTCGGCCGCA ATGTCAACAC TCAGCTCTTC AATTAACTCA
CTCGCTTCAT CGACGGTAAC CGATCTGCTG GGGGGCAACG CTTCACTGAA ACGCTCCAGG
TTGATAAGCC TCGGATGGGC AGCCGTACTC ATCAGCATAG CACTGGTATT TGATGAAAGC
GACAACGCAA TTGTCGTGCT GGGCCTTAAA ATCGCATCTT TTACCTACGG AGGACTGCTC
GGCCTTTTCC TCCTTTCCGT TAGCGGCAAA GAGTTTCATG TTTTCAGCCT CTCGATGGGG
CTGATAGCCG GGATGGGCAC AGTATTCGTG CTGGATTATC TGACCTTTGC ATGGACCTGG
TACATAGCCG CCTCAGTCCT TGCCAACCTG CTTGTAGTCT GGATTACCGA GACTGTTTTG
AATAACAGTT TCATAAGACG ATCGTAA
 
Protein sequence
MQTLDLIIII GFLAAMAGYG IWQGHTNRTT GDYFLGGRNL PWIVAMFSIV ATETSVLTFV 
SIPGIAFRGD WTFLQLAMGY IIGRMLVSAV LLPIYFRQGV SSIYEVIGNR FGPHMQKLAS
TVFLVTRILA DGVRFLATAV VVEAVTGWSL SASVLIIGIV TLVYTLSGGI RTIVWIDSIQ
FVLYFVGGII TIAFIAANLD VGLPEALGAL ANEGKLKVIN HDWRLFSEPW AFFSALTGGI
LLSFASHGVD YMMVQRVLGC KNLSAARKAM IGSGFFVFIQ FTVFLLAGSL IYLFIGDVQI
EKDREFASFI VNHLPVGLKG LLLAGVLSAA MSTLSSSINS LASSTVTDLL GGNASLKRSR
LISLGWAAVL ISIALVFDES DNAIVVLGLK IASFTYGGLL GLFLLSVSGK EFHVFSLSMG
LIAGMGTVFV LDYLTFAWTW YIAASVLANL LVVWITETVL NNSFIRRS