| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0256 |
|---|
| Symbol | |
|---|
| ID | 6373911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 246928 |
|---|
| End bp | 248256 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642682770 |
|---|
| Product | pentapeptide repeat protein |
|---|
| Protein accession | YP_001958706 |
|---|
| Protein GI | 189499236 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.306319 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CACTGATTTT TTCGAGTATT CTTCTGGCAT TGCAGGGAGG GCCTGCCTGC
AATACGACCT TCGGATTTGA TTCCGCCACT CTTAAAGAGC TTCTTTCCGG TGTTGGCGAA
TGGAACTCCA TGCGTTCCGG ACAACCATCG AGAACCATAA ATCTGGACAA GGCGACTCTC
GAGGATGCAA CTCTTGTAAA TGCCGACCTG CACAATGCGA GTATGGTAAA CACAAGGCTT
AACGGCGCGA AGCTCAATGG AGCAGATTTC CGTAATGCAA AGCTTTTTTC AGCAAGCCTG
AAAAGAACAG ATCTCAAGCA AACAGATCTG AGCGGAGCAA ACCTACGGGG AGCCGACCTG
AAAAATTCCT ATGCGAAAGA AGCAAAATTC ATTAACGCTG ACCTTACCGG TACCGATTTT
CGATATGCAA ATCTTGAAGG AGCAGACCTG ACAGGTGCTG TTCTTGAAAA CGCTCTCTTT
TTTGATGCCA ACCTCAGCTC TGCTGATCTC AGGGGAGTAA ATCTGACCGG AGCAAAAATG
CTCGGACAGG CAACGCTTCT CAATGCAAGA ATTTCAAACA ATACCATTCT TCCGTCTGGA
AAGCGAGCCA CACCTCTCTG GGCTTCACTA CACGGAGCCC GCTTCTCGAA AGAGACCGAA
CGTTCGCCGG TTGTCATGAA ATATGAACCG CTTCCGCCCC CTGTGGTTTC CGGCAACGCT
ACTGAAAGTG ACCCGGAGTC CATTACCACC GAAAATGTTT CCGAAACACT CCTCATGGAG
GATGTCACCG CATGGAACGA ACTTCGAAAA CAATACCCCG AAATGGAAAC CGATCTTCAG
GATGAAGACC TCGATGATGC CGGTTTGAAA GGTGCTGACA TGAAAAAGCT CGACATGACA
AGCTCAACCA TGAACGGAGC GAAACTGGAT CATGCCGACT TTTCAGAGTC TGACCTGTCG
AGTACGTCAT GGAAAAGAGC AAGCCTGGTA GAAACCGTTT TCCGTAACGC GAACCTTCAG
GGAGCCGATT TTAACCGTGC ATTCATGAAA AAAGCCGACC TGAGCGGCGC CGATCTGACT
GGCGCGCAGC TCCGTGAGAC AAGACTTCAG GAAGCTGATC TTAAAAAATC AAATCTTTCA
AAAACCAATC TCTACGATAC CGATCTCACG TGCGCCGATT TGAGGGGGGC TGATCTGACC
GGGGCCAATC TCCTCTATAC CATTTTGGAC AATGCCCTGA TTTCCGCTGA AACCATCACG
CCTTCAGGAG AAAAAGCAAC TACGGGATGG GCGGTATTGA AAGGTGCTAC GTTTGTTCGT
GAGAAGTAA
|
|---|
| Protein sequence | MKKTLIFSSI LLALQGGPAC NTTFGFDSAT LKELLSGVGE WNSMRSGQPS RTINLDKATL
EDATLVNADL HNASMVNTRL NGAKLNGADF RNAKLFSASL KRTDLKQTDL SGANLRGADL
KNSYAKEAKF INADLTGTDF RYANLEGADL TGAVLENALF FDANLSSADL RGVNLTGAKM
LGQATLLNAR ISNNTILPSG KRATPLWASL HGARFSKETE RSPVVMKYEP LPPPVVSGNA
TESDPESITT ENVSETLLME DVTAWNELRK QYPEMETDLQ DEDLDDAGLK GADMKKLDMT
SSTMNGAKLD HADFSESDLS STSWKRASLV ETVFRNANLQ GADFNRAFMK KADLSGADLT
GAQLRETRLQ EADLKKSNLS KTNLYDTDLT CADLRGADLT GANLLYTILD NALISAETIT
PSGEKATTGW AVLKGATFVR EK
|
|---|
| |