| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0248 |
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| Symbol | trmE |
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| ID | 6373903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 239908 |
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| End bp | 241329 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642682762 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001958698 |
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| Protein GI | 189499228 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAC CAGTTTCCCT TCCTCTCCAG GGTGAGCCGA TTGCCGCTGT TGCTACTCCG
GTAGGGGTCG GCGCGCTTGC TGTGGTCAGG ATGAGCGGTG AGGGTGTTTT TTCTATCGCG
GACCGGGTCT TTACCAAGGT TCGTTCGCCG GAAACATCTT TGGCTGACTC TCCTGGGTAT
ACCGCCCATT TCGGGAAGTT GTATGACGGC GACAGGATGA TTGACGAGGT GATCGTGCTG
GTGTTCCGGT CACCTGATTC TTTCACGGTC GAGGATATGG TCGAGATCAC CTGTCACGGC
GGTCCTGTGG TGACAAAGCA TGTGCTGAAG CTTCTGCTCG ACAACGGATG CAGGCTCGCA
GAGCCTGGCG AGTTTACCCG ACGCGCATTC CTGAACGGGA GGATCGACCT CTTGCAGGCT
GAAGCGATCG GTGAAATGAT TCATGCCCGC TCGGAATCGG CATATCGGAC CGCGGTAAAC
CAGATGAGCG GAGGGCTTTC CGGGAGGCTC GGCACATTGC GTGAACAGCT TCTGCATTCC
TGCGCGCTGC TTGAACTGGA ACTTGATTTC AGTGAAGAGG ATGTCGAATT CCAGAGCAGG
GAGGAGTTGA GCGGGCAGGT AGAAAATCTG CAACAGGAAG TCGACAAGCT CGTGCAGTCC
TATCAGCACG GCAGGTTGCT GCGCGAGGGC GTGGCGACCG CCATTATCGG GAGGCCCAAT
GCGGGTAAAT CAACCCTGCT CAACGCCTTG CTCGGCGAGG AACGGGCCAT TGTCAGCCAC
ATGCCGGGCA CCACGAGGGA CTATATCGAG GAGTGTTTCA TCTATGAAAA AACCATGTTC
CGGCTTACCG ATACCGCCGG ACTCCGCGAG GCGGCTGAAG AGATCGAGCA CGAGGGAATC
CGGCGCAGCT ACGAGAAAAT CGCCGAAGCC GACCTGATCC TCTATCTGCT GGATATCGGA
GCCTCCGATT ATGAGGAGGA GACCAGTACT GTTACCGAGC TGCGCCAAAA GCATCCCGAC
ATTCAACTGC TGGTGGTTGC GAACAAGACC GATACCACAG AAGACAGCGC TGAGCGCTCA
GAAAAAGTTG CCGAAAAAAC CGGTTGTCAG GTGCTCGGTA TTTCAGCCCT GAAAGAGGAT
GGTCTCGATC GGTTGAAGGC CGGGATGAGC AGCATGGTCG AGGGACTGGA CAAGCTGCAC
GACGCGAGCG TGCTTGTCAC CAGCATGCGC CACTACGAGG CCCTGCGCAA CGCCTCGGAT
GCGCTACGCA ACGCCCGGGA ACTGATTGAC GCGCAATCGG AAACCGAACT CATAGCCTTC
GAACTCCGCT CCGCCCTCGA CTACGTCGGC GAGATTACCG GTAAGGTTGT TAACGAGGAG
GTTCTTAATG TCATCTTCGG GCAGTTCTGT ATCGGGAAGT GA
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| Protein sequence | MNEPVSLPLQ GEPIAAVATP VGVGALAVVR MSGEGVFSIA DRVFTKVRSP ETSLADSPGY
TAHFGKLYDG DRMIDEVIVL VFRSPDSFTV EDMVEITCHG GPVVTKHVLK LLLDNGCRLA
EPGEFTRRAF LNGRIDLLQA EAIGEMIHAR SESAYRTAVN QMSGGLSGRL GTLREQLLHS
CALLELELDF SEEDVEFQSR EELSGQVENL QQEVDKLVQS YQHGRLLREG VATAIIGRPN
AGKSTLLNAL LGEERAIVSH MPGTTRDYIE ECFIYEKTMF RLTDTAGLRE AAEEIEHEGI
RRSYEKIAEA DLILYLLDIG ASDYEEETST VTELRQKHPD IQLLVVANKT DTTEDSAERS
EKVAEKTGCQ VLGISALKED GLDRLKAGMS SMVEGLDKLH DASVLVTSMR HYEALRNASD
ALRNARELID AQSETELIAF ELRSALDYVG EITGKVVNEE VLNVIFGQFC IGK
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