Gene Cphamn1_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0238 
Symbol 
ID6373893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp226660 
End bp227751 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content51% 
IMG OID642682752 
Productpeptide chain release factor 2 
Protein accessionYP_001958688 
Protein GI189499218 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000385966 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGGAGC AAAAGAGCGT CTGCACGAGA TACACCACCG CATTGAACAG TTACGGGGGT 
ATCTTTGACG TTGACGAACG TTTGCACAAA ATAGGTGAAC TCGAGCAGAT CACCACAGAA
GAAAACTTCT GGGAGAACCA GCAGGAAGCC AACAAGATCG TAAAAGAGAT CAACGACCAT
AAACTATGGA CTGAAGGATT TCTCGCGCTT GAAAAACAAA CCGCTGACCT CAGGGAAGAA
CTGGAAATCG CTGAAGAACT CGGGGAAGAG TCACTTGCGG AAGAAATAGA CTCGCGCATC
GGTTCGATCG AGCAGAAAAT CGCTGAGATC GAATTCAAAA ACATGCTCTC CGGTAAAGAC
GATCCCGGCA ACGCACTGCT CACTATCAAT GCCGGTGCTG GCGGCACCGA AGCACAGGAC
TGGGCGGAGA TGCTCTACCG CATGTACCTG CGCTGGGCGG AACGTAAAGG GTTCAAGATT
TTCACCGATG ACTATCAGGA AGGCGATGGC GCAGGCATAA AAACCGCGAC GCTTGAGATA
CAGGGGCCCT ATGCATACGG CTACCTGAAA GCTGAAAACG GCGTCCATCG GCTGGTAAGG
GTCTCTCCTT TCGATTCGAA CGCTCGCCGC CACACCTCGT TTGCCAGTGT CTACTCCTAC
CCGGAAGCGC CGCCCGATGC TGAAATAGAG ATTCGCAAGG AGGACCTTGA ACTTTCCACC
TTCCGCAGCG GCGGCAAAGG CGGTCAGAAC GTCAACAAGG TTGAAACAGC CGTACGCATC
AAGCATATCC CTTCCGGGAT TGTCGTCTCC TGCCAACAGG AGCGTTCGCA GTTCCAGAAC
CGTGAACGGG CGACAAAAAT GCTGCGGGCA CAGCTTTACA AAAAGCAGCG TGAAGAGGAA
GAGGCAAGAA AACAGGCCGT TGAGGGCACG AAGAAAAAAA TCGAATGGGG TAGCCAGATC
CGCAGCTATG TCATGGATGA CAGAAGGATC AAGGACCACA GAACAAATTA TGAACGACAC
GACATCGAAA ATGTCCTTGA CGGCGATATC GACGATTTTA TAGAAAAATA TCTTTCGGAA
TTCACCAACT GA
 
Protein sequence
MKEQKSVCTR YTTALNSYGG IFDVDERLHK IGELEQITTE ENFWENQQEA NKIVKEINDH 
KLWTEGFLAL EKQTADLREE LEIAEELGEE SLAEEIDSRI GSIEQKIAEI EFKNMLSGKD
DPGNALLTIN AGAGGTEAQD WAEMLYRMYL RWAERKGFKI FTDDYQEGDG AGIKTATLEI
QGPYAYGYLK AENGVHRLVR VSPFDSNARR HTSFASVYSY PEAPPDAEIE IRKEDLELST
FRSGGKGGQN VNKVETAVRI KHIPSGIVVS CQQERSQFQN RERATKMLRA QLYKKQREEE
EARKQAVEGT KKKIEWGSQI RSYVMDDRRI KDHRTNYERH DIENVLDGDI DDFIEKYLSE
FTN