Gene Cphamn1_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0236 
Symbol 
ID6373891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp224897 
End bp225754 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content54% 
IMG OID642682750 
ProductPeptidase M23 
Protein accessionYP_001958686 
Protein GI189499216 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.668099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCC GCCACCTCAC CATCGTTGTT CTGCTCCTCC TCTGTTCCCT GTTGAACAGG 
GGATCGGACG CAGCAGAAAA CAACAAACCA GACCTGGCTC TTGACGCGAC AACAAAGGAA
CAGGGAGAGT TCTTTGTCGC GACAGTCAAC GGAAGTTCCT CCCGGCCTGA TCTCTGGTTC
AACGGCCAAA GCTTCGCCAT GTTCTGGCAA AACGACAGCA GCTACCGCGC GCTCGTCCCG
GTTGAAAACA TGCTGAAGCC CGGCAGCTAT GCCCTGCTGG CGAAATCGAA CGGCTGGAAA
GAAAAAATAC CGGTAGAGGT CACTTCGAAC AACCTGCCCG TACAGAAAAT ATGGCTCGAC
GAGAAAACCA ACAGCCTGAA AGCCACAAAA GAGGAAAAAG CGCAGGTGAA AGCCGCATTG
AGAACCGTCA GCGAGAGCAA GCTCTGGTCG GACCTGTTCA GCTACCCCTC ACAGGGAAGA
AAATCCAGTC CCTTCGGCGT AAAACGCTCC TACAACGGAG CACCGGTATC GAGCTACCAC
AAGGGAATCG ACATCGCTGT CCCTCAGGGT ACGCCCGTCC TGAGTCCGGC AAAAGGAAAA
ATCGTGCTTA CCGGCTATGA GGCGGAACGG TTTCACGTAC ACGGCAACAC CGTCATCATC
GACCACGGCC AGGGTTTGAC CTCGATCTAC ATGCACCTGC ACTCCATATC CGTCAATGAA
GGAGATATCG TCAGCAAGGG GGACACCATA GGCACAGTCG GCAGCACCGG CATCTCCACC
GGCGCACACC TCCACTGGGG GGTTTATTTA TACGGCACAA GTGTGGATCC GGAGTTATTT
GTGAAGAATC AGTATTGA
 
Protein sequence
MTRRHLTIVV LLLLCSLLNR GSDAAENNKP DLALDATTKE QGEFFVATVN GSSSRPDLWF 
NGQSFAMFWQ NDSSYRALVP VENMLKPGSY ALLAKSNGWK EKIPVEVTSN NLPVQKIWLD
EKTNSLKATK EEKAQVKAAL RTVSESKLWS DLFSYPSQGR KSSPFGVKRS YNGAPVSSYH
KGIDIAVPQG TPVLSPAKGK IVLTGYEAER FHVHGNTVII DHGQGLTSIY MHLHSISVNE
GDIVSKGDTI GTVGSTGIST GAHLHWGVYL YGTSVDPELF VKNQY