Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0236 |
Symbol | |
ID | 6373891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 224897 |
End bp | 225754 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642682750 |
Product | Peptidase M23 |
Protein accession | YP_001958686 |
Protein GI | 189499216 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.668099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCC GCCACCTCAC CATCGTTGTT CTGCTCCTCC TCTGTTCCCT GTTGAACAGG GGATCGGACG CAGCAGAAAA CAACAAACCA GACCTGGCTC TTGACGCGAC AACAAAGGAA CAGGGAGAGT TCTTTGTCGC GACAGTCAAC GGAAGTTCCT CCCGGCCTGA TCTCTGGTTC AACGGCCAAA GCTTCGCCAT GTTCTGGCAA AACGACAGCA GCTACCGCGC GCTCGTCCCG GTTGAAAACA TGCTGAAGCC CGGCAGCTAT GCCCTGCTGG CGAAATCGAA CGGCTGGAAA GAAAAAATAC CGGTAGAGGT CACTTCGAAC AACCTGCCCG TACAGAAAAT ATGGCTCGAC GAGAAAACCA ACAGCCTGAA AGCCACAAAA GAGGAAAAAG CGCAGGTGAA AGCCGCATTG AGAACCGTCA GCGAGAGCAA GCTCTGGTCG GACCTGTTCA GCTACCCCTC ACAGGGAAGA AAATCCAGTC CCTTCGGCGT AAAACGCTCC TACAACGGAG CACCGGTATC GAGCTACCAC AAGGGAATCG ACATCGCTGT CCCTCAGGGT ACGCCCGTCC TGAGTCCGGC AAAAGGAAAA ATCGTGCTTA CCGGCTATGA GGCGGAACGG TTTCACGTAC ACGGCAACAC CGTCATCATC GACCACGGCC AGGGTTTGAC CTCGATCTAC ATGCACCTGC ACTCCATATC CGTCAATGAA GGAGATATCG TCAGCAAGGG GGACACCATA GGCACAGTCG GCAGCACCGG CATCTCCACC GGCGCACACC TCCACTGGGG GGTTTATTTA TACGGCACAA GTGTGGATCC GGAGTTATTT GTGAAGAATC AGTATTGA
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Protein sequence | MTRRHLTIVV LLLLCSLLNR GSDAAENNKP DLALDATTKE QGEFFVATVN GSSSRPDLWF NGQSFAMFWQ NDSSYRALVP VENMLKPGSY ALLAKSNGWK EKIPVEVTSN NLPVQKIWLD EKTNSLKATK EEKAQVKAAL RTVSESKLWS DLFSYPSQGR KSSPFGVKRS YNGAPVSSYH KGIDIAVPQG TPVLSPAKGK IVLTGYEAER FHVHGNTVII DHGQGLTSIY MHLHSISVNE GDIVSKGDTI GTVGSTGIST GAHLHWGVYL YGTSVDPELF VKNQY
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