Gene Cphamn1_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0230 
Symbol 
ID6373885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp220074 
End bp220640 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content51% 
IMG OID642682744 
ProductNLP/P60 protein 
Protein accessionYP_001958680 
Protein GI189499210 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.382299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCTT CGTTGTTTCT GATCTGTTTT TCCTTTTTCC TCTCCCTTGG CCTTCCGACT 
GAATCGTTCG CTTCCATTAC ACCTGAAAAA AATGTCATTG AGCAGAGGCT TGAAAAGCCA
GCATGTTCCA TGAGCAGCTT TTTCAATGAC GTCAGGCAGT TTTTCGGGGT CAGGTACCGC
TGGGGCGGGC AGACGCCTGA AGGGTTTGAC TGTTCGGGTT TCGTGAAGTT CATGTATGAA
CGGGTGTTCA GTATGCGGCT TCCCCGGACA TCGATTGAAA TGGCTTCGAT CGGGGAAAAA
GTCGAGCGTG ATGAACTCAG GCCTGGCGAT CTGGTGTTTT TCAACACACG CGGGAAACGC
ATCAACCACG TCGGCATCTT CATCGGCAAC GGTACCTTCA TACACGCTTC GGTATCAAGA
GGCGTTACGG AAGACCGGCT ACAGCAGAAC TATTTCGCAA AGCGTTTCGT CGGAGCTGTC
CGGGTGATCG ACAACATCAT TCCCGCCATA CCTGACTTTT CAACTCCTTC CGAAGAAGAA
AGTAACGAGT CTGCACAGCA CTCGTGA
 
Protein sequence
MHASLFLICF SFFLSLGLPT ESFASITPEK NVIEQRLEKP ACSMSSFFND VRQFFGVRYR 
WGGQTPEGFD CSGFVKFMYE RVFSMRLPRT SIEMASIGEK VERDELRPGD LVFFNTRGKR
INHVGIFIGN GTFIHASVSR GVTEDRLQQN YFAKRFVGAV RVIDNIIPAI PDFSTPSEEE
SNESAQHS