Gene Cphamn1_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0195 
Symbol 
ID6373850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp192470 
End bp193348 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content52% 
IMG OID642682713 
Productperiplasmic solute binding protein 
Protein accessionYP_001958649 
Protein GI189499179 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.591767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.474509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTCTGC TGTTTTCACT TTGTTATTCA TCACTTTTCG CTGCCGCCCC CTCAAGCGAT 
GCTGTTACCG GAGCCGCAGA GAACATTCGT GTGGTAACGT CCATAGAGCC ATTGTCTTTT
TTTGTGAAAA GAGTCGGGGG CGACCGGGTG CATGTTGCGG TGATGGTGCC GCCCGGCGCT
AATCCGCACA GTTATGAACC CCGGCCGGCA CAGATGGCCG AGACGGCTAA AGCGCATCTG
TTTGTCAAAG CAGGTTCCGG TATTGAATTC GAGTTGGCCT GGATGAATAA ACTTATCGCA
TTGCGTTCCA CGATGACGGT CTGCAACGCT TCACAGGACG TTGGTCTGAG AGAGATGTCC
GAAAGAAATC ATGGTCACAC GCACGAGCAT AGCCGTAGTG ATCCTCATTT CTGGCTTTCA
CCGGATAACG CTATTCTGAT CGCCAGGAAT GTAGAACGTT CTCTTGTGGC TCTGGACCCT
GTCCATGCCG ATGAGTATGC GGAAAATCTC CGGAAACTCG AAGCACAGCT CATATCGCTC
AAAAGAGAGA TCACCCGGAA ACTCTCAGGT ATAAAAAACA GGAGCTTCAT GGTGTTTCAT
CCCGCATGGG GGTACTATGC TGCTGCCTTC AACCTGAAGC AGATAGCCGC GGAAGAAGAG
GGAAAGGAAC TGACTCCGAA AAAAATGCAG AGCGTGATCC GGCAGGCAAG AGCAGAAGGT
GTTCGGGTGG TTTTTGTTTC ACCGACATTC AGCACACTTC AGGCGGAAAC CATTGCTCGT
GAGATAGGTG GTGTTACCCG GCCGGTCGAT CCCCTGTCCG GTGAGTATAT CGCTAACCTG
CGCCAGGCGA CCGGTGCGTT TGTTGAAAGC ATGCGATGA
 
Protein sequence
MILLFSLCYS SLFAAAPSSD AVTGAAENIR VVTSIEPLSF FVKRVGGDRV HVAVMVPPGA 
NPHSYEPRPA QMAETAKAHL FVKAGSGIEF ELAWMNKLIA LRSTMTVCNA SQDVGLREMS
ERNHGHTHEH SRSDPHFWLS PDNAILIARN VERSLVALDP VHADEYAENL RKLEAQLISL
KREITRKLSG IKNRSFMVFH PAWGYYAAAF NLKQIAAEEE GKELTPKKMQ SVIRQARAEG
VRVVFVSPTF STLQAETIAR EIGGVTRPVD PLSGEYIANL RQATGAFVES MR