Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0192 |
Symbol | |
ID | 6373847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 188593 |
End bp | 189657 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642682710 |
Product | protein of unknown function DUF306 Meta and HslJ |
Protein accession | YP_001958646 |
Protein GI | 189499176 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3187] Heat shock protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000042827 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTTATG CTACCGCTGT TTTGAGTATT GTACTGCTTT TTGCCATGGC AGGGTGTCAA GGCAACTATA CAAAGCCGGA TGTGCCTCCT TCCGCAGGAG TATACGGGAA AAACATTACC TATGCAGGTG CGATTCCCTG CGCAGAGTGC ACGTTGCAAA AGCTTACGGT CACGCTTTTT GACGATGGAA CGTTTCGCCT GAAACGTGTT TCAGTCGGAG TGCAGGGCGG TGGTACTAAA GTCGAGTATG ATCTTGGACG ATGGAACCGG AAAAGTGGCC GTCTGGTATT GAATAACGGA GAAAAGTGGC CGCTGCAGTT CCGGTATATT TCAGGAAACG AGATACGGCT GCTGGACCAG CGGGGCAATG AAATTGTTTC AAATCTGGAC TACAGTCTGA GAAAGACCTC ATTTGTTGAT TTCCTCTCCG GTCCCCTGAC CATGAACGGT ATGTTTCTCT ATATGGCTGA CGCCTATACG TTCAGGGAGT GCCGTACCGG AAAAAACTAT CCGCTGGTTT TTGCAACGCC GAACAGCTCT ATTGAAAAAC AGTATCTTGC TTTGCGTTCC GGGCCGGGAA AGCCTTTGCT GGCAAAGCTA TCGGGCAGAT TTTCCATAAG AAGGCCTGAG CCGGGGGCAG CATCCCGGGA GCATATTATC GTTCAGGATT TCAAGCGTTT TCTGCCTCGA GGTACCTGCA GGAATCCCGG TAGTCCGGCA GCCGCCCTCT ACGGCATCTA TTGGAAAGTG ACAGCTATTT CCGGAAGTTC CGATCTCTTG AAAGTGAGTG GAAAAGTTCC CAATCTCGTG CTGTCGACAT ATGGTAACAG TGTCAAGGGA TATACAGGAT GTAACAGCCT TATGGGGTCA TACAAGCACT CGGGATCAGG GCTGTCATTC TCAAAGCTCT CCACCACACG CATGGCGTGC CCCGGCAGTT CAGGTCAAAT AGAAAAGGCA TTTCTTGCCG CACTCAGGAA GACGACCGGA TGGAAAATCA GCGGGAAAAC ACTGGAACTG TTTGACAGCA GAAAGAGACT GCTGATGCGT CTGAAAGCGG GTTGA
|
Protein sequence | MRYATAVLSI VLLFAMAGCQ GNYTKPDVPP SAGVYGKNIT YAGAIPCAEC TLQKLTVTLF DDGTFRLKRV SVGVQGGGTK VEYDLGRWNR KSGRLVLNNG EKWPLQFRYI SGNEIRLLDQ RGNEIVSNLD YSLRKTSFVD FLSGPLTMNG MFLYMADAYT FRECRTGKNY PLVFATPNSS IEKQYLALRS GPGKPLLAKL SGRFSIRRPE PGAASREHII VQDFKRFLPR GTCRNPGSPA AALYGIYWKV TAISGSSDLL KVSGKVPNLV LSTYGNSVKG YTGCNSLMGS YKHSGSGLSF SKLSTTRMAC PGSSGQIEKA FLAALRKTTG WKISGKTLEL FDSRKRLLMR LKAG
|
| |