| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0191 |
|---|
| Symbol | |
|---|
| ID | 6373846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 187930 |
|---|
| End bp | 188553 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642682709 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001958645 |
|---|
| Protein GI | 189499175 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000965406 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.990535 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTT TAGCATTTAG TCAAACAAAA TTAGGGAGTT CCTTAGCGTT GCCCGCGAAT
GGGTTGGGTG GGTCAAGGGC AACATCTTTT CTGGTGGCGC ATTTTGCTTT GCAAAATACA
GCCTCAAACC CTGCCGAAAA AAATCGGGCC CCGCTATCCA GCGGGATAAA CTCCGCCGAA
AAGCAAAAGG GCAAAAAGGA AGGGGGTTGG GGGGAAGGAA TTTTTGCCCT TTTGCTATTA
AGAATAGAGC GTTTCCGCTT TTCTCTGATT AAGAGAAAAC CAAAACAGAA AATTTTTCAT
CTCCTATTAA AAGAAAAAAA TGCCCGCGAA AAAATTAAAA AATGTAGAGA AAAATTTTCT
GTTTTGTTTT GCCGTAGCGG AGCGGAGGCA AGCGGAAACG CACCTCATTA TTATTCTGGA
TTTTCTTTGA AAAAAGTTCG GATTTCGTTC AGAGTTCGGA GCAAATCAAA AAAGCAGGAG
TACAGAAAGT GCTGCTGCTT TTTTGATTTT ATATCCGAAA TCGCCTCCTT TGCATGCCGG
TCATTCCATC AGAAAAAGCA GGTGCTCTGT AGAGAGCGTA TCCGTTTTTA TATTTCTTTT
TTGCTCGCTA TACTGTCCGG ATAG
|
|---|
| Protein sequence | MEFLAFSQTK LGSSLALPAN GLGGSRATSF LVAHFALQNT ASNPAEKNRA PLSSGINSAE
KQKGKKEGGW GEGIFALLLL RIERFRFSLI KRKPKQKIFH LLLKEKNARE KIKKCREKFS
VLFCRSGAEA SGNAPHYYSG FSLKKVRISF RVRSKSKKQE YRKCCCFFDF ISEIASFACR
SFHQKKQVLC RERIRFYISF LLAILSG
|
|---|
| |