Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0175 |
Symbol | |
ID | 6373829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 171024 |
End bp | 171542 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642682694 |
Product | HNH endonuclease |
Protein accession | YP_001958631 |
Protein GI | 189499161 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0259524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTAC GCAGAACAAA AGTACTTGTC CTCAACAGCA GCTATGAACC GCTGACCATT TGTGATGCGC AAAAAGCCAT AATTCTGCTT TTCTGCGGAA AAGCCGTATC GGTAGCTCAT CACCCTGAAC GGTTTGTCTG CACGGTATCA GAATCCTTTC CTCTGCCGAG TATTGTGCGG TTGAATGTTT TTGTCAGAGT GCCGTATAAG CATATAATGC TGACCAGAAA AAATATTTTC AGGCGGGACA ACTTTCAGTG CCAGTACTGC GGAACATGCG GCACCCCGCT TACCATAGAT CATATGACTC CTCGTTCACA GGGCGGAGAA GACTCCTGGG AAAATCTGGT CACAGCCTGC GGCCCCTGTA ACACAAAAAA AGGAAACAGA ACCCCGCAGG AAGCACGCAT GATTCCGCAG AAAAAACCGA TTCGTCCAAG CCATATCATG CTGATGCGGA AGTTCATTAC AACCGTATCA GAAGATTGGA AGCCTTATCT TTTCATGGCA TCTTCCTGA
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Protein sequence | MSLRRTKVLV LNSSYEPLTI CDAQKAIILL FCGKAVSVAH HPERFVCTVS ESFPLPSIVR LNVFVRVPYK HIMLTRKNIF RRDNFQCQYC GTCGTPLTID HMTPRSQGGE DSWENLVTAC GPCNTKKGNR TPQEARMIPQ KKPIRPSHIM LMRKFITTVS EDWKPYLFMA SS
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