Gene Cphamn1_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0175 
Symbol 
ID6373829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp171024 
End bp171542 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content47% 
IMG OID642682694 
ProductHNH endonuclease 
Protein accessionYP_001958631 
Protein GI189499161 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0259524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTAC GCAGAACAAA AGTACTTGTC CTCAACAGCA GCTATGAACC GCTGACCATT 
TGTGATGCGC AAAAAGCCAT AATTCTGCTT TTCTGCGGAA AAGCCGTATC GGTAGCTCAT
CACCCTGAAC GGTTTGTCTG CACGGTATCA GAATCCTTTC CTCTGCCGAG TATTGTGCGG
TTGAATGTTT TTGTCAGAGT GCCGTATAAG CATATAATGC TGACCAGAAA AAATATTTTC
AGGCGGGACA ACTTTCAGTG CCAGTACTGC GGAACATGCG GCACCCCGCT TACCATAGAT
CATATGACTC CTCGTTCACA GGGCGGAGAA GACTCCTGGG AAAATCTGGT CACAGCCTGC
GGCCCCTGTA ACACAAAAAA AGGAAACAGA ACCCCGCAGG AAGCACGCAT GATTCCGCAG
AAAAAACCGA TTCGTCCAAG CCATATCATG CTGATGCGGA AGTTCATTAC AACCGTATCA
GAAGATTGGA AGCCTTATCT TTTCATGGCA TCTTCCTGA
 
Protein sequence
MSLRRTKVLV LNSSYEPLTI CDAQKAIILL FCGKAVSVAH HPERFVCTVS ESFPLPSIVR 
LNVFVRVPYK HIMLTRKNIF RRDNFQCQYC GTCGTPLTID HMTPRSQGGE DSWENLVTAC
GPCNTKKGNR TPQEARMIPQ KKPIRPSHIM LMRKFITTVS EDWKPYLFMA SS