Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0171 |
Symbol | infC |
ID | 6373825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 164758 |
End bp | 165366 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642682690 |
Product | translation initiation factor IF-3 |
Protein accession | YP_001958627 |
Protein GI | 189499157 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0802308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAAA AAAGAAGCGC TCCTCAAAAA CCAAAAGTAA CGTATCGAGT GAACGGGCAG ATCAGAGTGC CTGAGGTTAG AGTAGTTTTT AAAGACGGCT CACAGGAGAT CATCAAAACA AGCCAGGCAA TTAAAATGGC CGAGCAAGAG GGGCTTGATC TCATAGAAGT ACAGCCTACA GCCACGCCTC CTGTCTGCAA GATGGACAAT TACGGAAAGC TGCAGTACAA ACTTGATAAA AACGACAGGG ATCGGAAAAA GAAATCGAAA CCGACGTCAT TAAAAGAGCT CAGGTTTCAC CCGAATACCG ACAAGCACGA TTTTGATTTC AAAGCAGCTC ACCTTGAAGA GTTTCTTCGC AAGGGCAACA GGGTTCGCGC AACCGTTGTT TTTCTCGGTC GCTCGATCAT TTACAAGGAC AAAGGCTATG AACTTGTCGA ACGTCTGACC GAACGCCTCA GCACTGTCAG CAACCGCGAA GGCTCCCCCA AATTTGAAGG GAAAAAGCTG TTCGTCTATT TCGAACCTGA CAAGAAAAAA ATCGAGGTAC ATGAGAGGAT GCTGGCAAAA ATGAAGAAGG AACAACAAAA CAAAGAAGCG GAAAACTAA
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Protein sequence | MRKKRSAPQK PKVTYRVNGQ IRVPEVRVVF KDGSQEIIKT SQAIKMAEQE GLDLIEVQPT ATPPVCKMDN YGKLQYKLDK NDRDRKKKSK PTSLKELRFH PNTDKHDFDF KAAHLEEFLR KGNRVRATVV FLGRSIIYKD KGYELVERLT ERLSTVSNRE GSPKFEGKKL FVYFEPDKKK IEVHERMLAK MKKEQQNKEA EN
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