Gene Cphamn1_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0171 
SymbolinfC 
ID6373825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp164758 
End bp165366 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content45% 
IMG OID642682690 
Producttranslation initiation factor IF-3 
Protein accessionYP_001958627 
Protein GI189499157 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0802308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAA AAAGAAGCGC TCCTCAAAAA CCAAAAGTAA CGTATCGAGT GAACGGGCAG 
ATCAGAGTGC CTGAGGTTAG AGTAGTTTTT AAAGACGGCT CACAGGAGAT CATCAAAACA
AGCCAGGCAA TTAAAATGGC CGAGCAAGAG GGGCTTGATC TCATAGAAGT ACAGCCTACA
GCCACGCCTC CTGTCTGCAA GATGGACAAT TACGGAAAGC TGCAGTACAA ACTTGATAAA
AACGACAGGG ATCGGAAAAA GAAATCGAAA CCGACGTCAT TAAAAGAGCT CAGGTTTCAC
CCGAATACCG ACAAGCACGA TTTTGATTTC AAAGCAGCTC ACCTTGAAGA GTTTCTTCGC
AAGGGCAACA GGGTTCGCGC AACCGTTGTT TTTCTCGGTC GCTCGATCAT TTACAAGGAC
AAAGGCTATG AACTTGTCGA ACGTCTGACC GAACGCCTCA GCACTGTCAG CAACCGCGAA
GGCTCCCCCA AATTTGAAGG GAAAAAGCTG TTCGTCTATT TCGAACCTGA CAAGAAAAAA
ATCGAGGTAC ATGAGAGGAT GCTGGCAAAA ATGAAGAAGG AACAACAAAA CAAAGAAGCG
GAAAACTAA
 
Protein sequence
MRKKRSAPQK PKVTYRVNGQ IRVPEVRVVF KDGSQEIIKT SQAIKMAEQE GLDLIEVQPT 
ATPPVCKMDN YGKLQYKLDK NDRDRKKKSK PTSLKELRFH PNTDKHDFDF KAAHLEEFLR
KGNRVRATVV FLGRSIIYKD KGYELVERLT ERLSTVSNRE GSPKFEGKKL FVYFEPDKKK
IEVHERMLAK MKKEQQNKEA EN