| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0169 |
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| Symbol | rplT |
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| ID | 6373823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 164152 |
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| End bp | 164499 |
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| Gene Length | 348 bp |
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| Protein Length | 115 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642682688 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001958625 |
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| Protein GI | 189499155 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00435705 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAAGAG CTACTAATTC AGTTGCATCA CGTGCAAGAA GAAAAAGAAT ATTAAAGAAG
GCTAAAGGTT ACTGGGGCTC ACGGGGAACG ATTCTGACAG TTGCCAAGCA TGCCGTTGAC
AAAGCGGAAC AGTATGCCTA CCGTGACAGA AGGGTTAAAA AAAGAACCTT CCGTTCTTTG
TGGATCATGA GGATTAACGC TGCCGCACGA GAAAACGGCA CCAGCTATTC AAGACTGATG
GAAGCGATGA ACAAGAAAAG TATAGACATC AACCGGAAAG CTCTTGCTGA AATAGCGGTT
AAAGATCCAG CCGCTTTCAG CCAGATCGTT AAATCCGCTA TGGGCTGA
|
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| Protein sequence | MPRATNSVAS RARRKRILKK AKGYWGSRGT ILTVAKHAVD KAEQYAYRDR RVKKRTFRSL
WIMRINAAAR ENGTSYSRLM EAMNKKSIDI NRKALAEIAV KDPAAFSQIV KSAMG
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