Gene Cphamn1_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0152 
Symbol 
ID6373801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp145580 
End bp147778 
Gene Length2199 bp 
Protein Length732 aa 
Translation table11 
GC content60% 
IMG OID642682666 
Productcatalase/peroxidase HPI 
Protein accessionYP_001958608 
Protein GI189499138 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0376] Catalase (peroxidase I) 
TIGRFAM ID[TIGR00198] catalase/peroxidase HPI 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00125055 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAC ACAGCAGGTG CCCTGTAACG GGCAGAACAG CCGGCAACCC AGTCGCCGGC 
GGCGGCATAG CAAACCGTGA CTGGTGGCCG AACCAGTTGC ATCTCGATAT GCTTCACCAA
CACTCTTCCC TGAGCAATCC TATGGAAGAA GCGTTCAAGT ACAAAGAGGA ATTCGGGAAA
CTCGATCTGA AAGCGGTGAA AAAAGACCTC TATACGCTGA TGACCGATTC GCAGGAATGG
TGGCCGGCCG ATTACGGTCA TTATGGAGGG CTCTTTATCC GGATGACCTG GCACAGCGCG
GGCACCTATC GAACCGGCGA CGGGCGCGGC GGCGGCGGCA CCGGCAATCA ACGCTTCGCG
CCGCTCAACA GCTGGCCCGA CAATGCGAAC CTCGACAAGG CGCGCCGACT GCTCTGGCCT
ATCAAGCAGA AGTACGGAAA AAAACTTTCC TGGGCCGACC TCATGATCCT TGCGGGCAAC
TACGCACTGG AATCGATGGG GTTCAAGACC TTCGGGTTCG GCGGAGGGCG CGTGGACATC
TGGGAGCCGG AGGAGGATAT TTACTGGGGC AAGGAGGTAG AGTGGCTCGA CAACAAGCGC
TACAGCGGGG AACGTGATCT GGAAAACCCG CTGGCCGCCG TGCAGATGGG GCTGATCTAC
GTCAATCCCG AAGGACCGGA CGGCAAACCG GACCCCGTTG CCGCGGGCAA AGACATCCGC
GAAACCTTCG GACGCATGGC CATGAACGAC GAGGAGACCG TCGCGCTCGT GGCAGGAGGT
CACACCTTCG GCAAATGTCA CGGTGTTGGC GATCCGAAGC TCGTAGGCCC TGAGCCAGAA
GCCGCTGACA TCGAGGAGCA GGGGCTCGGC TGGAAAAGCG GCTACGGCAG CGGCAAGGGT
GACGAAACCA TGACCAGCGG ACTGGAAGGC GCATGGACGC CCGATCCGAT TCATTGGGAT
ATGGGCTATC TCGGCATGCT CTTCAAATAC GAGTGGGAAC TGACAAAAAG CCCTGCAGGA
GCATGGCAGT GGAAACCGAC AGATGTGGCC GAAGAGGATC TCGCGCCGGC CGCCCACGAT
CCGTCGAAAC GCGTGCCGAC CATGATGACC ACCGCAGACC TGGCGATGCG CATGGATCCG
ATCTATGGGC CGATTTCACG ACGCTACTAT GAGCATCCCG ACCAGTTCGC GGACGCTTTT
GCCCGTGCGT GGTTCAAGCT GACGCATCGC GACATGGGTC CCAAATCGCG CTATCTGGGC
ACGGAGGTGC CGGAAGAGGA TCTGATCTGG CAGGATCCTG TACCGGCTGT CGATCATGAG
CTGATCGGCG ACAGAGAGAT CGCAGAGCTC AAGAAAAGGC TTCTTGCCTC CGGCCTTTCG
ATCCCGGAAC TGGTCTCGAC CGCCTGGGCT TCGGCCTCCA CCTTCCGCGG CTCGGACAAG
CGAGGCGGGG CCAACGGCGC GCGCATCCGG CTCGCCCCGC AGAAGGACTG GGAGGTCAAC
CAGCCGGAAC AGTTAAAGAT CGTGCTGCAG AAACTTGAAG AGATACGGCA GGAGTTCAAC
GATGCGCAGT CGGGAGGCAA GAGGGTTTCG CTGGCCGACC TGATCGTGCT CGGTGGATGC
GCAGGCGTCG AAGAAGCGGC CAGAAAAGCT GGTACAGACG TGACCATCCC TTTCACGCCG
GGCCGTACGG ATGCCTCGCA GGAACAGACC GACACGGAGT CCTTTGCCGT GCTGGAACCG
CTCGCTGACG GGTTCCGCAA CTACATGAAA AAGAAATACA GCGTGTCCGC CGAGGAAATG
CTGGTCGACC GTTCGCAGCT GCTGACACTC ACCGCCCCGG AAATGACCGT GCTCGTCGGC
GGCCTGCGTG TGCTGAACGT CAATTTCGGT CAGTCGCCGC ATGGCGTCTT CACCACACTC
CCGGAAACAC TGACCAATGA CTTCTTCGTC AACCTGCTCG ACATGGGCAC GGAGTGGAAA
CCGCTCTCCA AAGAGCATGA CACCTTCGAA GGCCGCGACC GCAAAACCGG AGAACCCAGG
TGGACCGCCA CCCGTGTCGA CCTCATCTTC GGCTCCAACT CCCGGCTCCG GGCCATCGCG
GAAGTCTACG GAAGCGACAA TGCACAGGAG AAGTTCGTGC ATGACTTCGT CGCCGCATGG
AACAAGGTAA TGAATCTTGA TCGCTTCGAG CTCGGGTAA
 
Protein sequence
MSEHSRCPVT GRTAGNPVAG GGIANRDWWP NQLHLDMLHQ HSSLSNPMEE AFKYKEEFGK 
LDLKAVKKDL YTLMTDSQEW WPADYGHYGG LFIRMTWHSA GTYRTGDGRG GGGTGNQRFA
PLNSWPDNAN LDKARRLLWP IKQKYGKKLS WADLMILAGN YALESMGFKT FGFGGGRVDI
WEPEEDIYWG KEVEWLDNKR YSGERDLENP LAAVQMGLIY VNPEGPDGKP DPVAAGKDIR
ETFGRMAMND EETVALVAGG HTFGKCHGVG DPKLVGPEPE AADIEEQGLG WKSGYGSGKG
DETMTSGLEG AWTPDPIHWD MGYLGMLFKY EWELTKSPAG AWQWKPTDVA EEDLAPAAHD
PSKRVPTMMT TADLAMRMDP IYGPISRRYY EHPDQFADAF ARAWFKLTHR DMGPKSRYLG
TEVPEEDLIW QDPVPAVDHE LIGDREIAEL KKRLLASGLS IPELVSTAWA SASTFRGSDK
RGGANGARIR LAPQKDWEVN QPEQLKIVLQ KLEEIRQEFN DAQSGGKRVS LADLIVLGGC
AGVEEAARKA GTDVTIPFTP GRTDASQEQT DTESFAVLEP LADGFRNYMK KKYSVSAEEM
LVDRSQLLTL TAPEMTVLVG GLRVLNVNFG QSPHGVFTTL PETLTNDFFV NLLDMGTEWK
PLSKEHDTFE GRDRKTGEPR WTATRVDLIF GSNSRLRAIA EVYGSDNAQE KFVHDFVAAW
NKVMNLDRFE LG