Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0129 |
Symbol | |
ID | 6373778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 127976 |
End bp | 128683 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642682648 |
Product | PHP domain protein |
Protein accession | YP_001958590 |
Protein GI | 189499120 |
COG category | [R] General function prediction only |
COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.155774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACAGT GGCTGTACTG CGATTTTCAT ATTCACACGA CGTGGAGCGA CGGGAAGTAC TCGCTCGACG ATGTGGTCGG GCTCTACGGG GAGGCCGGGT TCGACGTGAT CGCGATTACT GACCATGTGC TCGACAGCGA GAGCATCCGG AGATCTGCAA AGCCGGTTTC GGAGCTCCTT GTGATGGACG GCGACGACTT CGGCGCCTAT CAGGAATCGC TGTGGAAAGC GGCGAGGAAC GCCTGGGAGA GCTACGGGAT GCTCCTGATT CCGGGCGTGG AGCTGACCAA CAACACGGAC CGTTACCACA TTCTCGCCCT CGATATCAAG GAGTATATCT CTCCCGACCT TTCTGTCGAG GAGATTGTCG CATGCGTCAG GAGGCAGCAG GGGATCTCTG TGGCCTGCCA TCCGTATATC AGAAACCACT CAGGCGACGA TCCGTCCTTC TATCTCTGGG AAAACCACGA ACGGCTCGCG ACCCAGTTCG ATGCGTGGGA GGTCGCCAAC AGGGACGACC TGTTCAATGT GGTCGGGCTG AAAAAATTCA ACTACATCGC CAGTTCCGAC TTCCATGAGG AACGGCACCT GCACTCATGG AAGACGCTCC TGCAGTGCGA AAAAAACGTC GAATCGGTCA AGGATGCTAT TAGGAAGAAT GACCGGGTGT CGCTTTTTCT TTATAGGGGC GGGAAGATAA AAGAGTAG
|
Protein sequence | MQQWLYCDFH IHTTWSDGKY SLDDVVGLYG EAGFDVIAIT DHVLDSESIR RSAKPVSELL VMDGDDFGAY QESLWKAARN AWESYGMLLI PGVELTNNTD RYHILALDIK EYISPDLSVE EIVACVRRQQ GISVACHPYI RNHSGDDPSF YLWENHERLA TQFDAWEVAN RDDLFNVVGL KKFNYIASSD FHEERHLHSW KTLLQCEKNV ESVKDAIRKN DRVSLFLYRG GKIKE
|
| |