| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0107 |
|---|
| Symbol | |
|---|
| ID | 6373751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 100610 |
|---|
| End bp | 101944 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642682624 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_001958571 |
|---|
| Protein GI | 189499101 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATGG GTAAAAAGCT GATCAGTACC GGATTGTTAT TGCTGCTGTT TATGATCGTT
GCTGATACGG TCTGGGCTTC AGACGGGGTC ACAGATTCCG GCACAACGGC ATGGATGCTG
ACCGCAACGA CTCTTGTTCT GCTCATGGTG CCGGGGCTGG CAATGTTCTA TGGGGGGCTC
GTGCGCACAA AAAATGTTCT CGGCACCATG ATGCACAGTT TTGCTGCAAT GGTTGTTATC
GGGGTATTAT GGCCCTTTCT GGGGTATGCA TTGAGCTTCG GGCCAAGTGT ATTGGGCGGC
CTTGTCGGGT GGAATCCTGA CTATGTGCTG CTTCGAGGAA TTGACGATTC AATTCTGGAT
TCGGGTATTC CTGAATATGT GTTTGCCATG TTTCAGGGGA AATTCGCTAT CATCGCGCCT
GCCCTGATAG CTGGTGCTTT TGCTGAAAGA GTCAGCTTCA GAGGGTATGT CGTGTTTATT
GCGCTCTGGA GTCTCGTGGT GTATAGCCCG ATCTGTCACT GGGTTTGGGC TGAAGATGGT
TTTCTGTTCA ATATGGGGCC GGCAGGGGCT ATAGATTTTG CGGGAGGTAC CGTCGTGCAT
ATCTCTTCCG GTATCAGCGC TCTTGTGGCC GCACTGTTTC TCGGTTCAAG GCGTGGATAT
CCGAAAAATG TCATGCATCC CAACAATCTG GTTATGACGA TGATTGGTGC CGGATTGCTC
TGGGTAGGGT GGTTTGGATT CAACGCGGGC AGCGCTGTTG CCAGTGATCT CGATACAGGA
AGGGCGCTTA CCGTCACACA GATTGCGGCG GCAGCTGGAG CGGGAGCCTG GATGATCATA
GAGTCGCTGC TGTACAAAAA AATAACGACT CTCGGGGTTG TGTCGGGTAT TCTTGCAGGT
CTTGTTGCGA TAACCCCTGC AGCAGGTGTC GTTCAGCCTG GTGGCGCAAT GGTGATCGGT
ATTCTCGCGT CTGTGTTCTG TTTTCTGGCC ATTCAGGTGA AAAACCGTGC AGGATATGAT
GACAGTCTCG ACGCGTTCGG TATTCATGGG ATCGGTGGTA TTGTGGGTGC TCTCGCACTC
ACCTTTTTCA TTCGTGAAGC CTGGATGGCT GATGCAGCGG TGGCCGCGGG AGGCAGCTGG
ACTGTCTGGC AGCAGTTTGG TGTTCAGGCA GCTGCAGTGG TGATTACGAT CGTCTACGCG
GCTATTGTCA CGATCATTCT GCTCGTTATT ATTGAAAAAA CCATTGGTTT CCGCTTGAAA
GAGACTGATG AAATGACCGG ACTTGATCAG AGCCTGCATG GGGAGCACGG TTATGGTCTT
ATCAACCTTA ATTAA
|
|---|
| Protein sequence | MVMGKKLIST GLLLLLFMIV ADTVWASDGV TDSGTTAWML TATTLVLLMV PGLAMFYGGL
VRTKNVLGTM MHSFAAMVVI GVLWPFLGYA LSFGPSVLGG LVGWNPDYVL LRGIDDSILD
SGIPEYVFAM FQGKFAIIAP ALIAGAFAER VSFRGYVVFI ALWSLVVYSP ICHWVWAEDG
FLFNMGPAGA IDFAGGTVVH ISSGISALVA ALFLGSRRGY PKNVMHPNNL VMTMIGAGLL
WVGWFGFNAG SAVASDLDTG RALTVTQIAA AAGAGAWMII ESLLYKKITT LGVVSGILAG
LVAITPAAGV VQPGGAMVIG ILASVFCFLA IQVKNRAGYD DSLDAFGIHG IGGIVGALAL
TFFIREAWMA DAAVAAGGSW TVWQQFGVQA AAVVITIVYA AIVTIILLVI IEKTIGFRLK
ETDEMTGLDQ SLHGEHGYGL INLN
|
|---|
| |